Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm14200-201ENSMUST00000122256 192 ntBASIC7.86□□□□□ -1.15
HttP42859 Gm5401-201ENSMUST00000122444 365 ntBASIC7.86□□□□□ -1.15
HttP42859 Gm14302-201ENSMUST00000122806 382 ntTSL 3 BASIC7.86□□□□□ -1.15
HttP42859 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Nudt7-205ENSMUST00000147605 966 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Gm25363-201ENSMUST00000158850 245 ntBASIC7.86□□□□□ -1.15
HttP42859 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
HttP42859 Gm22917-201ENSMUST00000180116 110 ntBASIC7.86□□□□□ -1.15
HttP42859 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
HttP42859 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC7.86□□□□□ -1.15
HttP42859 Gm35638-201ENSMUST00000220724 652 ntBASIC7.86□□□□□ -1.15
HttP42859 AC174797.2-203ENSMUST00000224017 716 ntBASIC7.86□□□□□ -1.15
HttP42859 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC7.86□□□□□ -1.15
HttP42859 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC7.86□□□□□ -1.15
HttP42859 Adam17-201ENSMUST00000064536 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
HttP42859 Mtmr4-202ENSMUST00000103179 5753 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Gm9585-201ENSMUST00000219681 1404 ntBASIC7.86□□□□□ -1.15
HttP42859 Trcg1-201ENSMUST00000093837 2701 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
HttP42859 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
HttP42859 Ighv9-1-201ENSMUST00000103471 294 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
HttP42859 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
HttP42859 Gm14787-201ENSMUST00000121236 388 ntBASIC7.86□□□□□ -1.15
HttP42859 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC7.86□□□□□ -1.15
HttP42859 Gm17212-201ENSMUST00000166666 259 ntBASIC7.86□□□□□ -1.15
HttP42859 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC7.86□□□□□ -1.15
HttP42859 Gm8245-201ENSMUST00000182434 987 ntBASIC7.86□□□□□ -1.15
HttP42859 Cd68-201ENSMUST00000018918 1230 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Gm6639-201ENSMUST00000196349 429 ntTSL 3 BASIC7.86□□□□□ -1.15
HttP42859 Gm42753-201ENSMUST00000196718 1268 ntBASIC7.86□□□□□ -1.15
HttP42859 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC7.86□□□□□ -1.15
HttP42859 Gm9280-201ENSMUST00000223155 517 ntBASIC7.86□□□□□ -1.15
HttP42859 Dusp27-202ENSMUST00000192369 4045 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
HttP42859 CT009757.4-201ENSMUST00000221520 2541 ntBASIC7.86□□□□□ -1.15
HttP42859 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Pan2-201ENSMUST00000005825 4445 ntAPPRIS P2 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Gm15765-201ENSMUST00000118407 910 ntBASIC7.85□□□□□ -1.15
HttP42859 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
HttP42859 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Olfr574-201ENSMUST00000052997 1041 ntAPPRIS P2 BASIC7.85□□□□□ -1.15
HttP42859 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
HttP42859 Olfr1320-203ENSMUST00000214375 1831 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Pvt1-203ENSMUST00000181657 2798 ntTSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Gm28352-201ENSMUST00000186654 2167 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Gm28226-201ENSMUST00000186916 2169 ntTSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Gm28972-201ENSMUST00000186990 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Gm29302-201ENSMUST00000187209 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Gm28866-201ENSMUST00000187298 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Gm28878-201ENSMUST00000188272 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Gm28246-201ENSMUST00000188308 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Gm28823-201ENSMUST00000188540 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Gm29046-201ENSMUST00000188653 2167 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Gm28346-201ENSMUST00000189021 2167 ntTSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Gm8582-201ENSMUST00000164061 789 ntBASIC7.85□□□□□ -1.15
HttP42859 Gm42437-201ENSMUST00000197263 923 ntBASIC7.85□□□□□ -1.15
HttP42859 AC112680.2-201ENSMUST00000213119 595 ntBASIC7.85□□□□□ -1.15
HttP42859 4930555G07Rik-201ENSMUST00000218226 634 ntTSL 3 BASIC7.85□□□□□ -1.15
HttP42859 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.85□□□□□ -1.15
HttP42859 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.85□□□□□ -1.15
HttP42859 Sun3-201ENSMUST00000043377 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Champ1-202ENSMUST00000128557 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Dgcr2-204ENSMUST00000117945 4003 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Zfp239-201ENSMUST00000079405 3158 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
HttP42859 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
HttP42859 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
HttP42859 Gm44802-201ENSMUST00000208026 1916 ntBASIC7.85□□□□□ -1.15
HttP42859 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC7.85□□□□□ -1.15
HttP42859 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
HttP42859 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms