Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm44001-201ENSMUST00000203158 3773 ntBASIC9.09□□□□□ -0.96
Traf1P39428 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC9.08□□□□□ -0.96
Traf1P39428 Gm26730-201ENSMUST00000181270 1338 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC9.08□□□□□ -0.96
Traf1P39428 Gm37283-201ENSMUST00000193111 1571 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Pglyrp4-203ENSMUST00000169698 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Traf1P39428 Phlpp2-203ENSMUST00000179721 7846 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Pld1-202ENSMUST00000120834 4849 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Traf1P39428 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Traf1P39428 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Trps1-206ENSMUST00000184458 5293 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC9.08□□□□□ -0.96
Traf1P39428 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC9.08□□□□□ -0.96
Traf1P39428 Gm12993-201ENSMUST00000119900 479 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC9.08□□□□□ -0.96
Traf1P39428 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Mir8095-201ENSMUST00000185103 129 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Gm29144-201ENSMUST00000189235 339 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Gm29238-201ENSMUST00000189709 695 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Gm28607-201ENSMUST00000190142 339 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Gm28121-201ENSMUST00000191420 339 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Gm37469-201ENSMUST00000193728 890 ntBASIC9.08□□□□□ -0.96
Traf1P39428 1700021F02Rik-201ENSMUST00000197576 350 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
Traf1P39428 Gm6885-201ENSMUST00000217261 372 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Pclo-202ENSMUST00000182407 16846 ntTSL 5 BASIC9.08□□□□□ -0.96
Traf1P39428 Olfr1462-202ENSMUST00000208533 3424 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
Traf1P39428 Pcdh11x-201ENSMUST00000050239 4442 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Traf1P39428 Mr1-201ENSMUST00000027744 2512 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Gm14802-201ENSMUST00000121944 1885 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
Traf1P39428 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC9.08□□□□□ -0.96
Traf1P39428 Ints4-201ENSMUST00000026126 3240 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Gm43251-201ENSMUST00000198339 2712 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Gm10744-201ENSMUST00000220184 2706 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Myof-201ENSMUST00000041475 6902 ntAPPRIS P2 TSL 2 BASIC9.08□□□□□ -0.96
Traf1P39428 Agtpbp1-206ENSMUST00000164215 4331 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC9.08□□□□□ -0.96
Traf1P39428 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
Traf1P39428 Gm6823-201ENSMUST00000120791 1839 ntBASIC9.08□□□□□ -0.96
Traf1P39428 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Traf1P39428 Gm45512-201ENSMUST00000210432 1553 ntBASIC9.07□□□□□ -0.96
Traf1P39428 Setd5-203ENSMUST00000113157 6527 ntTSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Traf1P39428 Dixdc1-201ENSMUST00000034566 5709 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Traf1P39428 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Traf1P39428 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Traf1P39428 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Traf1P39428 Gm28720-201ENSMUST00000190728 3156 ntBASIC9.07□□□□□ -0.96
Traf1P39428 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Traf1P39428 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Traf1P39428 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Traf1P39428 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Traf1P39428 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC9.07□□□□□ -0.96
Traf1P39428 Gm10157-201ENSMUST00000139408 343 ntBASIC9.07□□□□□ -0.96
Traf1P39428 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC9.07□□□□□ -0.96
Traf1P39428 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
Traf1P39428 Gm6176-201ENSMUST00000178209 906 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Traf1P39428 Gm4567-201ENSMUST00000178591 906 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Traf1P39428 n-R5s115-201ENSMUST00000179019 119 ntBASIC9.07□□□□□ -0.96
Traf1P39428 Gm10668-201ENSMUST00000179491 906 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Traf1P39428 Oosp1-203ENSMUST00000186557 495 ntAPPRIS ALT2 TSL 2 BASIC9.07□□□□□ -0.96
Traf1P39428 Gm4545-201ENSMUST00000190797 603 ntBASIC9.07□□□□□ -0.96
Traf1P39428 Gm28266-201ENSMUST00000191410 439 ntBASIC9.07□□□□□ -0.96
Traf1P39428 Gm36945-201ENSMUST00000192040 864 ntTSL 3 BASIC9.07□□□□□ -0.96
Traf1P39428 A730082K24Rik-202ENSMUST00000205795 658 ntTSL 3 BASIC9.07□□□□□ -0.96
Traf1P39428 AC162183.1-201ENSMUST00000224843 472 ntBASIC9.07□□□□□ -0.96
Traf1P39428 n-R5s193-201ENSMUST00000082864 109 ntBASIC9.07□□□□□ -0.96
Traf1P39428 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Gm43679-201ENSMUST00000197051 3677 ntBASIC9.07□□□□□ -0.96
Traf1P39428 Slmapos2-201ENSMUST00000160089 2194 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Traf1P39428 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Traf1P39428 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Gm38386-201ENSMUST00000194293 3421 ntBASIC9.07□□□□□ -0.96
Traf1P39428 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Traf1P39428 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Zfp652-202ENSMUST00000107717 10433 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Traf1P39428 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Traf1P39428 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms