Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC6.86□□□□□ -1.31
P20040 Gm5681-201ENSMUST00000189217 1533 ntBASIC6.86□□□□□ -1.31
P20040 Gm42603-201ENSMUST00000199893 2146 ntBASIC6.86□□□□□ -1.31
P20040 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
P20040 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Hdac9-205ENSMUST00000209902 7940 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
P20040 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
P20040 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Gm11348-201ENSMUST00000118813 318 ntBASIC6.86□□□□□ -1.31
P20040 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC6.86□□□□□ -1.31
P20040 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Gm7031-201ENSMUST00000173709 919 ntBASIC6.86□□□□□ -1.31
P20040 Gm24083-201ENSMUST00000175174 120 ntBASIC6.86□□□□□ -1.31
P20040 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC6.86□□□□□ -1.31
P20040 Gm17970-201ENSMUST00000192199 685 ntBASIC6.86□□□□□ -1.31
P20040 Gm8407-201ENSMUST00000192719 427 ntBASIC6.86□□□□□ -1.31
P20040 Gm38164-201ENSMUST00000192810 330 ntBASIC6.86□□□□□ -1.31
P20040 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC6.86□□□□□ -1.31
P20040 Gm42431-201ENSMUST00000196880 323 ntBASIC6.86□□□□□ -1.31
P20040 Gm42489-201ENSMUST00000198964 669 ntBASIC6.86□□□□□ -1.31
P20040 Gm18060-201ENSMUST00000207407 564 ntBASIC6.86□□□□□ -1.31
P20040 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
P20040 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC6.86□□□□□ -1.31
P20040 Gm21941-201ENSMUST00000221121 562 ntBASIC6.86□□□□□ -1.31
P20040 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
P20040 AC165281.1-201ENSMUST00000225713 1011 ntBASIC6.86□□□□□ -1.31
P20040 AC154249.1-201ENSMUST00000226296 320 ntBASIC6.86□□□□□ -1.31
P20040 AC147096.1-201ENSMUST00000227648 352 ntBASIC6.86□□□□□ -1.31
P20040 CT009556.2-201ENSMUST00000227980 1123 ntBASIC6.86□□□□□ -1.31
P20040 Rab3b-201ENSMUST00000003502 1053 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Gm2098-201ENSMUST00000189146 1763 ntBASIC6.86□□□□□ -1.31
P20040 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
P20040 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
P20040 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Gm15097-201ENSMUST00000101180 2029 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
P20040 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
P20040 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
P20040 Gm15107-201ENSMUST00000112796 2028 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
P20040 Gm15080-201ENSMUST00000112804 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Gm15109-201ENSMUST00000133085 2026 ntBASIC6.86□□□□□ -1.31
P20040 Ott-201ENSMUST00000177554 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Ott-202ENSMUST00000177606 2028 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
P20040 Gm15085-201ENSMUST00000178169 2028 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Ott-203ENSMUST00000179348 2028 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
P20040 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.86□□□□□ -1.31
P20040 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC6.86□□□□□ -1.31
P20040 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
P20040 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
P20040 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Vwa3a-201ENSMUST00000033180 4575 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
P20040 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
P20040 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Gm43123-201ENSMUST00000201893 3471 ntBASIC6.85□□□□□ -1.31
P20040 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Gm24257-201ENSMUST00000104472 131 ntBASIC6.85□□□□□ -1.31
P20040 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC6.85□□□□□ -1.31
P20040 Gm11756-202ENSMUST00000107312 924 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
P20040 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Gm12075-201ENSMUST00000117426 397 ntBASIC6.85□□□□□ -1.31
P20040 Gm15209-201ENSMUST00000117703 400 ntBASIC6.85□□□□□ -1.31
P20040 Gm14099-201ENSMUST00000117769 605 ntBASIC6.85□□□□□ -1.31
P20040 Gm12310-201ENSMUST00000118013 492 ntBASIC6.85□□□□□ -1.31
P20040 Gm13458-201ENSMUST00000118239 367 ntBASIC6.85□□□□□ -1.31
P20040 Gm15574-201ENSMUST00000119937 405 ntBASIC6.85□□□□□ -1.31
P20040 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC6.85□□□□□ -1.31
P20040 Gm11838-201ENSMUST00000121999 231 ntBASIC6.85□□□□□ -1.31
P20040 Gm25320-201ENSMUST00000122551 324 ntBASIC6.85□□□□□ -1.31
P20040 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Gm25721-201ENSMUST00000157496 171 ntBASIC6.85□□□□□ -1.31
P20040 Gm17235-201ENSMUST00000169128 964 ntBASIC6.85□□□□□ -1.31
P20040 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
P20040 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
P20040 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
P20040 Gm4891-201ENSMUST00000182279 912 ntBASIC6.85□□□□□ -1.31
P20040 Mir6999-201ENSMUST00000183498 61 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms