Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Sdc1P18828 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Sdc1P18828 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Celf2-202ENSMUST00000100429 7491 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sdc1P18828 Rxfp1-201ENSMUST00000078527 5382 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 Igsf5-204ENSMUST00000113795 1031 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm14824-201ENSMUST00000119421 737 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Gm14813-201ENSMUST00000122291 395 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 Tcl1b2-202ENSMUST00000142230 851 ntTSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Tbata-210ENSMUST00000151886 915 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 1700049E15Rik-202ENSMUST00000152737 921 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm24786-201ENSMUST00000157379 109 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 Fam47e-205ENSMUST00000175974 1016 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm28478-201ENSMUST00000185802 183 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Scgb1b12-201ENSMUST00000188355 417 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Sdc1P18828 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm17889-201ENSMUST00000198410 598 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm6308-201ENSMUST00000203226 313 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 AC139323.1-201ENSMUST00000223370 1040 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Rpp30-201ENSMUST00000025714 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm5619-201ENSMUST00000071172 760 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Gm8325-201ENSMUST00000099086 453 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sdc1P18828 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sdc1P18828 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Sdc1P18828 Olfr472-201ENSMUST00000209670 5290 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Sdc1P18828 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Sdc1P18828 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Sdc1P18828 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Kif24-201ENSMUST00000030148 4333 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Pik3r3-201ENSMUST00000030464 5257 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Sdc1P18828 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.18□□□□□ -1.42
Sdc1P18828 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
Sdc1P18828 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 2900064K03Rik-201ENSMUST00000196567 3113 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 Zfp157-201ENSMUST00000085856 5312 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm14144-201ENSMUST00000128602 1721 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 4930442J19Rik-202ENSMUST00000157058 1721 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm25594-201ENSMUST00000102274 82 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm25502-201ENSMUST00000104428 131 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Pla2g2d-202ENSMUST00000105806 1206 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm14410-201ENSMUST00000108964 912 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Sdc1P18828 Gm14561-201ENSMUST00000117376 798 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm14891-201ENSMUST00000117378 596 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm14519-201ENSMUST00000118490 312 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm15571-201ENSMUST00000119887 637 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm15096-201ENSMUST00000121918 878 ntBASIC6.17□□□□□ -1.42
Sdc1P18828 Gm15694-201ENSMUST00000121984 283 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms