Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Agbl1-202ENSMUST00000107442 2617 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 AC159193.3-201ENSMUST00000221902 2622 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Vmn1r218-202ENSMUST00000226692 10430 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm37107-201ENSMUST00000195326 2552 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm45061-201ENSMUST00000204395 2095 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm37702-201ENSMUST00000194357 1872 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm4907-201ENSMUST00000116614 1493 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm20877-201ENSMUST00000100105 1212 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Ighv14-2-201ENSMUST00000103467 351 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdx1P18111 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm26012-201ENSMUST00000104411 128 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm22150-201ENSMUST00000104447 135 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Olfr329-ps-202ENSMUST00000108823 1060 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Cdx1P18111 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm11207-201ENSMUST00000117824 414 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm12361-201ENSMUST00000119806 1044 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm15224-201ENSMUST00000120501 388 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC6.31□□□□□ -1.4
Cdx1P18111 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm5977-201ENSMUST00000174304 573 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdx1P18111 Mir6940-201ENSMUST00000183447 70 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm7863-201ENSMUST00000184700 805 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Krtap14-202ENSMUST00000189774 856 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm4208-201ENSMUST00000189802 871 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm44203-201ENSMUST00000203134 307 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 AC153845.1-201ENSMUST00000213596 428 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm35177-201ENSMUST00000216525 623 ntTSL 3 BASIC6.31□□□□□ -1.4
Cdx1P18111 AC153937.2-202ENSMUST00000219583 670 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 CT030175.1-201ENSMUST00000220822 408 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm8616-201ENSMUST00000222175 1037 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 AC129975.2-201ENSMUST00000223705 775 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 CT025603.3-201ENSMUST00000224031 419 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 AC124736.1-201ENSMUST00000226382 419 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 AC118250.2-201ENSMUST00000228890 416 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Cdx1P18111 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm10335-201ENSMUST00000096020 468 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Gm10132-201ENSMUST00000099431 468 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Nlrp14-202ENSMUST00000142623 1437 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Nt5c1b-202ENSMUST00000118657 1792 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.31□□□□□ -1.4
Cdx1P18111 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Prkaa1-201ENSMUST00000051186 4655 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Cdx1P18111 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Cdx1P18111 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Tmem167-203ENSMUST00000161568 8689 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 BC051077-201ENSMUST00000181440 2044 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Vmn1r196-202ENSMUST00000226245 5312 ntAPPRIS ALT2 BASIC6.3□□□□□ -1.4
Cdx1P18111 Ankrd45-202ENSMUST00000111608 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Olfr1215-202ENSMUST00000214809 2683 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm30698-201ENSMUST00000214789 3198 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm22426-201ENSMUST00000103811 96 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm14188-201ENSMUST00000105060 168 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Zfp637-204ENSMUST00000112861 1202 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Cdx1P18111 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm9164-201ENSMUST00000118700 1014 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm15220-201ENSMUST00000120730 379 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Defa-ps10-201ENSMUST00000121649 171 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.3□□□□□ -1.4
Cdx1P18111 B230216N24Rik-201ENSMUST00000159324 1140 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm17139-201ENSMUST00000163802 571 ntTSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm17258-201ENSMUST00000168462 1266 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Ube2i-212ENSMUST00000174001 623 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm20485-201ENSMUST00000174452 394 ntTSL 2 BASIC6.3□□□□□ -1.4
Cdx1P18111 Gm25947-201ENSMUST00000180343 110 ntBASIC6.3□□□□□ -1.4
Cdx1P18111 Gm8529-201ENSMUST00000183298 745 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms