Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Gm25607-201ENSMUST00000104020 127 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Gm23706-201ENSMUST00000104369 82 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Fate1-202ENSMUST00000114569 1053 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
UbbP0CG49 Gm11546-201ENSMUST00000120297 354 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Bdh2-202ENSMUST00000120397 1172 ntTSL 5 BASIC6.69□□□□□ -1.34
UbbP0CG49 E330017L17Rik-202ENSMUST00000139190 861 ntTSL 5 BASIC6.69□□□□□ -1.34
UbbP0CG49 Gm22388-201ENSMUST00000158194 248 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC6.69□□□□□ -1.34
UbbP0CG49 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC6.69□□□□□ -1.34
UbbP0CG49 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
UbbP0CG49 1700036G14Rik-201ENSMUST00000189046 542 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Gm28193-201ENSMUST00000189863 615 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Mark4-ps-201ENSMUST00000196140 384 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Gm44203-201ENSMUST00000203134 307 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.69□□□□□ -1.34
UbbP0CG49 Gm44833-201ENSMUST00000208368 331 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Gm3774-201ENSMUST00000209773 435 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC6.69□□□□□ -1.34
UbbP0CG49 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC6.69□□□□□ -1.34
UbbP0CG49 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC6.69□□□□□ -1.34
UbbP0CG49 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC6.69□□□□□ -1.34
UbbP0CG49 AC161374.2-201ENSMUST00000223662 596 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 AC163667.2-201ENSMUST00000223769 791 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 AC154747.2-201ENSMUST00000225109 780 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 AC167013.6-201ENSMUST00000226587 1067 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 CT009550.2-201ENSMUST00000228851 399 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC6.69□□□□□ -1.34
UbbP0CG49 Fate1-201ENSMUST00000066116 938 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Mir187-201ENSMUST00000083598 61 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
UbbP0CG49 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
UbbP0CG49 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC6.69□□□□□ -1.34
UbbP0CG49 Gm20706-201ENSMUST00000175985 2023 ntBASIC6.69□□□□□ -1.34
UbbP0CG49 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
UbbP0CG49 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 Tcf4-202ENSMUST00000078486 7147 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
UbbP0CG49 Eya4-202ENSMUST00000092665 5304 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
UbbP0CG49 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Ank3-207ENSMUST00000181974 3751 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Gm14762-202ENSMUST00000122953 1430 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Gm45832-201ENSMUST00000212762 1443 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
UbbP0CG49 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Gm15283-201ENSMUST00000125308 1451 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 Gm28497-201ENSMUST00000189646 3029 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 Gm14519-201ENSMUST00000118490 312 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 Gm12844-201ENSMUST00000119463 582 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC6.68□□□□□ -1.34
UbbP0CG49 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 Gm7369-201ENSMUST00000192738 936 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 Ighv1-33-201ENSMUST00000193220 350 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC6.68□□□□□ -1.34
UbbP0CG49 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC6.68□□□□□ -1.34
UbbP0CG49 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 Gm5609-201ENSMUST00000210008 1267 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 4930428N03Rik-205ENSMUST00000225654 892 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 AC158519.1-201ENSMUST00000228615 179 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 Retnlb-201ENSMUST00000023328 695 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 CT025535.2-201ENSMUST00000228572 7441 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
UbbP0CG49 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.68□□□□□ -1.34
UbbP0CG49 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
UbbP0CG49 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms