Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm23706-201ENSMUST00000104369 82 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm13255-201ENSMUST00000117255 547 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm13005-201ENSMUST00000119518 585 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm11763-201ENSMUST00000119964 312 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm28845-201ENSMUST00000144760 733 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm16226-203ENSMUST00000161197 395 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 5730435O14Rik-202ENSMUST00000170047 617 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Vmn2r-ps125-201ENSMUST00000176234 931 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm26784-201ENSMUST00000181666 410 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm9423-201ENSMUST00000183173 997 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm7560-201ENSMUST00000187748 873 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm28864-201ENSMUST00000189251 644 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm28244-201ENSMUST00000189342 356 ntTSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm20223-201ENSMUST00000199932 805 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm43690-201ENSMUST00000201213 266 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm44833-201ENSMUST00000208368 331 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm8948-201ENSMUST00000216371 370 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm8058-201ENSMUST00000217247 587 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm18024-201ENSMUST00000218516 690 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 AC132468.1-201ENSMUST00000224706 499 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gpr119-201ENSMUST00000053970 2269 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm37372-201ENSMUST00000193577 3311 ntBASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Nup93-203ENSMUST00000211822 2674 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Nup35Q8R4R6 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm43158-201ENSMUST00000198484 1555 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm37984-201ENSMUST00000191641 3733 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm45634-201ENSMUST00000209736 1990 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm26012-201ENSMUST00000104411 128 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm5228-201ENSMUST00000117186 357 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm13542-201ENSMUST00000118484 637 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm13622-201ENSMUST00000120658 433 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Glrx2-206ENSMUST00000145969 924 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Mir7659-201ENSMUST00000184079 58 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm8004-201ENSMUST00000187782 617 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Igkv8-22-201ENSMUST00000199501 367 ntBASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Nup35Q8R4R6 Gm45889-201ENSMUST00000209535 1057 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms