Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Tceanc-203ENSMUST00000180322 1080 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm26980-201ENSMUST00000183321 395 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm6750-201ENSMUST00000189273 268 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm37024-201ENSMUST00000192224 868 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm6236-201ENSMUST00000193785 1009 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm37072-201ENSMUST00000194570 837 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm42760-201ENSMUST00000199814 311 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm44690-201ENSMUST00000207984 382 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm9689-201ENSMUST00000210009 428 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 AC162176.1-201ENSMUST00000216490 618 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 AC122360.1-201ENSMUST00000217737 624 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Ccdc14-201ENSMUST00000023532 4107 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm18289-201ENSMUST00000203356 2989 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm8107-201ENSMUST00000117477 2009 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Lrriq3-203ENSMUST00000194376 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Rbpj-201ENSMUST00000037618 5459 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm44752-201ENSMUST00000207140 3305 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm6819-201ENSMUST00000185325 1891 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Kbtbd4-201ENSMUST00000090682 2437 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Olfr1497-202ENSMUST00000217384 1672 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm42811-201ENSMUST00000201951 2768 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Mapk1ip1l-201ENSMUST00000164235 4531 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm22271-201ENSMUST00000104035 128 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Homer1-208ENSMUST00000109495 813 ntTSL 5 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm12604-201ENSMUST00000118382 380 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm12978-201ENSMUST00000121250 522 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm12870-201ENSMUST00000121383 1016 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm11933-201ENSMUST00000121550 375 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm25320-201ENSMUST00000122551 324 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm24899-201ENSMUST00000158892 73 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm24307-201ENSMUST00000178512 101 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm29362-201ENSMUST00000187898 133 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Mir7230-201ENSMUST00000195977 56 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm17835-201ENSMUST00000196870 499 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm8896-201ENSMUST00000197434 1106 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm7565-201ENSMUST00000203611 623 ntBASIC7.44□□□□□ -1.22
Clrn1Q8K445 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 B930018H19Rik-201ENSMUST00000211381 2121 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Olfr433-202ENSMUST00000214690 2968 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Clrn1Q8K445 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Clrn1Q8K445 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms