Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm45183-201ENSMUST00000207937 1497 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Tlk2-203ENSMUST00000106939 5494 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm26965-201ENSMUST00000167914 1520 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 AY761185-201ENSMUST00000110758 448 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Ptgds-202ENSMUST00000114251 830 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm15233-201ENSMUST00000118747 400 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm13720-201ENSMUST00000120741 196 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm12140-201ENSMUST00000121214 544 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm25319-201ENSMUST00000122552 325 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Snhg12-201ENSMUST00000126380 890 ntTSL 2 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Ly6g6e-202ENSMUST00000172494 464 ntTSL 3 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm22392-201ENSMUST00000177971 107 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm27913-201ENSMUST00000184473 173 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm4208-201ENSMUST00000189802 871 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Iglc4-201ENSMUST00000197046 314 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm43198-201ENSMUST00000200927 326 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm18641-201ENSMUST00000211763 1246 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 AC153975.1-201ENSMUST00000220087 926 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm6195-201ENSMUST00000063059 357 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Olfr573-ps1-201ENSMUST00000064830 888 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm24145-201ENSMUST00000082631 163 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm10272-201ENSMUST00000092371 350 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Olfr32-201ENSMUST00000099755 1016 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm5533-201ENSMUST00000070987 1343 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Mgat5-202ENSMUST00000171405 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Lias-201ENSMUST00000031101 2996 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Apol10b-201ENSMUST00000089465 1986 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Pcdhb7Q8CDY9 Ccdc28a-201ENSMUST00000052648 2255 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Afp-201ENSMUST00000042755 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Agbl4-206ENSMUST00000106592 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Gm15533-202ENSMUST00000206216 3262 ntBASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Gm10472-201ENSMUST00000193014 2102 ntBASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Gabpb2-203ENSMUST00000107204 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Gm44874-201ENSMUST00000206586 1542 ntBASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 AC162301.1-201ENSMUST00000228785 1542 ntBASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Myt1-202ENSMUST00000108756 5509 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Lrguk-201ENSMUST00000070189 3058 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Mum1l1-203ENSMUST00000113043 4600 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Olfr523-203ENSMUST00000213953 3445 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Pcdhb7Q8CDY9 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Mir582-201ENSMUST00000103758 81 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm14777-201ENSMUST00000116306 176 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm11359-201ENSMUST00000120039 567 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Rps10-ps4-201ENSMUST00000120308 492 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm13080-201ENSMUST00000120556 420 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm14979-201ENSMUST00000121561 1035 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Myhas-201ENSMUST00000137662 787 ntTSL 5 BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 2210408F21Rik-205ENSMUST00000138606 482 ntTSL 5 BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 1700049E15Rik-202ENSMUST00000152737 921 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm23555-201ENSMUST00000157815 135 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm22893-201ENSMUST00000158637 116 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Rps10-208ENSMUST00000178774 498 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm23145-201ENSMUST00000178912 79 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm27927-201ENSMUST00000183791 126 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Mir6354-201ENSMUST00000184979 116 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Tspy-ps-203ENSMUST00000186546 989 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Cysrt1-203ENSMUST00000186719 909 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm28639-201ENSMUST00000191519 481 ntBASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Pcdhb7Q8CDY9 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms