Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm19815-201ENSMUST00000175818 335 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 4930438E09Rik-201ENSMUST00000176841 776 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm5327-201ENSMUST00000182864 1009 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm27019-201ENSMUST00000183056 404 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm6610-201ENSMUST00000186324 358 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm9451-201ENSMUST00000188491 604 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm29126-201ENSMUST00000188686 151 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm37871-201ENSMUST00000194973 688 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm2287-201ENSMUST00000197417 1084 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm45401-201ENSMUST00000209456 733 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 AC162176.1-201ENSMUST00000216490 618 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm10197-201ENSMUST00000086887 201 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Mas1-206ENSMUST00000162333 1750 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 AC125409.2-201ENSMUST00000221888 2158 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm17137-201ENSMUST00000164106 4371 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Stab2-201ENSMUST00000035288 8228 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm24257-201ENSMUST00000104472 131 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm14053-201ENSMUST00000121662 470 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm16276-201ENSMUST00000131218 262 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm23117-201ENSMUST00000158482 108 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 4930599A14Rik-201ENSMUST00000186724 387 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm29144-201ENSMUST00000189235 339 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm29238-201ENSMUST00000189709 695 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28607-201ENSMUST00000190142 339 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28121-201ENSMUST00000191420 339 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm37392-201ENSMUST00000192098 516 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm1647-201ENSMUST00000195406 735 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm18131-201ENSMUST00000199241 449 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm42760-201ENSMUST00000199814 311 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm20274-201ENSMUST00000206967 584 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm44561-201ENSMUST00000208869 264 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 AC102582.1-201ENSMUST00000215376 378 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm7441-201ENSMUST00000220697 1074 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm21941-201ENSMUST00000221121 562 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 CT009556.3-201ENSMUST00000226173 513 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Snora9-201ENSMUST00000082579 133 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm28720-201ENSMUST00000190728 3156 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Chn1os3-201ENSMUST00000147420 2707 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Cntn5-205ENSMUST00000179049 2682 ntTSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Tbc1d24-205ENSMUST00000168378 4350 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Ranbp9-208ENSMUST00000222651 1951 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm2098-201ENSMUST00000189146 1763 ntBASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
Vps53Q8CCB4 Gm42648-201ENSMUST00000200774 2505 ntBASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Usp40-201ENSMUST00000040783 5049 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Vps53Q8CCB4 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms