Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm42973-201ENSMUST00000197913 3200 ntBASIC9□□□□□ -0.97
Alx1Q8C8B0 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9□□□□□ -0.97
Alx1Q8C8B0 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Alx1Q8C8B0 Slc38a2-201ENSMUST00000023099 4626 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Alx1Q8C8B0 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC9□□□□□ -0.97
Alx1Q8C8B0 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC9□□□□□ -0.97
Alx1Q8C8B0 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Alx1Q8C8B0 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Alx1Q8C8B0 Ergic2-208ENSMUST00000136008 4174 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Alx1Q8C8B0 Gm37499-201ENSMUST00000194683 3478 ntBASIC9□□□□□ -0.97
Alx1Q8C8B0 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Alx1Q8C8B0 Gm38302-201ENSMUST00000191676 2076 ntBASIC9□□□□□ -0.97
Alx1Q8C8B0 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC9□□□□□ -0.97
Alx1Q8C8B0 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Add1-205ENSMUST00000114340 3761 ntAPPRIS P3 TSL 5 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Cyp2c55-201ENSMUST00000025966 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Myo1e-201ENSMUST00000034745 4625 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 AC154347.1-201ENSMUST00000221358 3105 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Smarca1-203ENSMUST00000101616 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 n-R5s9-201ENSMUST00000104432 117 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Gm25725-201ENSMUST00000104528 130 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 4930526L06Rik-201ENSMUST00000181137 1022 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Gm38254-201ENSMUST00000192276 1009 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Olfr715-201ENSMUST00000076958 1131 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Trpm3-201ENSMUST00000037901 5082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Gm39041-201ENSMUST00000205557 3902 ntBASIC8.99□□□□□ -0.97
Alx1Q8C8B0 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Pcbp2-202ENSMUST00000078404 2829 ntTSL 2 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm23323-201ENSMUST00000104471 133 ntBASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm13988-201ENSMUST00000119363 288 ntBASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm23079-201ENSMUST00000157847 117 ntBASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm24824-201ENSMUST00000175097 78 ntBASIC8.98□□□□□ -0.97
Alx1Q8C8B0 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm38305-201ENSMUST00000194825 223 ntBASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Olfr905-201ENSMUST00000051111 937 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Cd44-205ENSMUST00000111191 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
Alx1Q8C8B0 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms