Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Mtf1-201ENSMUST00000030723 7631 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm14762-201ENSMUST00000105109 1771 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 AC154270.2-201ENSMUST00000226755 2306 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 1700007F19Rik-201ENSMUST00000188418 1642 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Hbq1b-201ENSMUST00000101387 562 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Tcrg-V1-201ENSMUST00000103564 374 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm15096-201ENSMUST00000121918 878 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm10086-201ENSMUST00000136334 354 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm12248-201ENSMUST00000137124 933 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm25947-201ENSMUST00000180343 110 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 Mir6940-201ENSMUST00000183447 70 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm18351-201ENSMUST00000188646 883 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm16833-202ENSMUST00000189204 672 ntTSL 2 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm45401-201ENSMUST00000209456 733 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 Olfr471-201ENSMUST00000210091 936 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm34322-201ENSMUST00000214224 719 ntTSL 5 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 AC154249.1-201ENSMUST00000226296 320 ntBASIC8.23□□□□□ -1.09
CtifQ6PEE2 Tmco5-201ENSMUST00000028834 1164 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gja6-201ENSMUST00000069417 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Map3k7-203ENSMUST00000108183 5416 ntTSL 5 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Fam205a1-201ENSMUST00000107979 4146 ntAPPRIS P1 TSL 3 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 A130023I24Rik-201ENSMUST00000152709 1897 ntTSL 2 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
CtifQ6PEE2 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm30329-201ENSMUST00000211572 3077 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 n-R5s2-201ENSMUST00000101968 119 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 n-R5s194-201ENSMUST00000104719 119 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Rita1-202ENSMUST00000111884 733 ntTSL 2 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm5270-201ENSMUST00000121506 1002 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm22881-201ENSMUST00000157747 134 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm17088-201ENSMUST00000164616 581 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm8964-201ENSMUST00000165944 805 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm23187-201ENSMUST00000175746 86 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 n-R5s210-201ENSMUST00000177688 119 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 n-R5s112-201ENSMUST00000178208 119 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 n-R5s125-201ENSMUST00000179377 119 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 n-R5s120-201ENSMUST00000180000 119 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm29068-201ENSMUST00000191607 400 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm36961-201ENSMUST00000191980 132 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm42495-201ENSMUST00000200324 405 ntTSL 3 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm44156-201ENSMUST00000203885 1189 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm44928-201ENSMUST00000208098 128 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm10046-202ENSMUST00000208942 126 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 AC154687.1-201ENSMUST00000224875 677 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 CT030646.1-201ENSMUST00000225049 980 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Manf-201ENSMUST00000069036 960 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 n-R5s33-201ENSMUST00000093713 119 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 BC003331-201ENSMUST00000006167 1716 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Gm38009-201ENSMUST00000194884 3341 ntBASIC8.22□□□□□ -1.09
CtifQ6PEE2 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
CtifQ6PEE2 Vmn1r16-202ENSMUST00000227283 5813 ntAPPRIS P2 BASIC8.21□□□□□ -1.09
CtifQ6PEE2 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CtifQ6PEE2 Gm42546-201ENSMUST00000201584 2592 ntBASIC8.21□□□□□ -1.09
CtifQ6PEE2 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CtifQ6PEE2 Gm42653-201ENSMUST00000200644 2839 ntBASIC8.21□□□□□ -1.09
CtifQ6PEE2 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
CtifQ6PEE2 Kcnip4-206ENSMUST00000175660 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC8.21□□□□□ -1.09
CtifQ6PEE2 Gm18901-201ENSMUST00000197840 1444 ntBASIC8.21□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms