Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm29113-201ENSMUST00000185991 3432 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm5681-201ENSMUST00000189217 1533 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Icosl-201ENSMUST00000105393 2814 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC8.83□□□□□ -1
Hmgb1P63158 Gm2163-201ENSMUST00000179734 2723 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hmgb1P63158 A430018G15Rik-201ENSMUST00000124210 1314 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Nr1h5-202ENSMUST00000196135 1344 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Gm9256-201ENSMUST00000198106 1420 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC8.83□□□□□ -1
Hmgb1P63158 Gm25607-201ENSMUST00000104020 127 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm12170-201ENSMUST00000119281 300 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm11763-201ENSMUST00000119964 312 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm12402-201ENSMUST00000120536 334 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm16057-201ENSMUST00000120811 759 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC8.83□□□□□ -1
Hmgb1P63158 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC8.83□□□□□ -1
Hmgb1P63158 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC8.83□□□□□ -1
Hmgb1P63158 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hmgb1P63158 Gm12424-201ENSMUST00000179673 447 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm28530-201ENSMUST00000190473 577 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC8.83□□□□□ -1
Hmgb1P63158 Gm43560-201ENSMUST00000198100 773 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Ighv8-16-201ENSMUST00000199258 294 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC8.83□□□□□ -1
Hmgb1P63158 Tsg101-ps-201ENSMUST00000201023 1170 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm45401-201ENSMUST00000209456 733 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC8.83□□□□□ -1
Hmgb1P63158 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC8.83□□□□□ -1
Hmgb1P63158 1700069L16Rik-201ENSMUST00000047891 537 ntAPPRIS P5 TSL 2 BASIC8.83□□□□□ -1
Hmgb1P63158 Mir365-2-201ENSMUST00000083555 112 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC8.83□□□□□ -1
Hmgb1P63158 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Erc2-210ENSMUST00000211145 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Hmgb1P63158 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Hmgb1P63158 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Hspa9-ps1-201ENSMUST00000119602 1933 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Gm38366-201ENSMUST00000193127 1934 ntBASIC8.83□□□□□ -1
Hmgb1P63158 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Gm37548-201ENSMUST00000194519 3814 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Hmgb1P63158 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC8.83□□□□□ -1
Hmgb1P63158 Gm44001-201ENSMUST00000203158 3773 ntBASIC8.83□□□□□ -1
Hmgb1P63158 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm42576-201ENSMUST00000202336 2846 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Hmgb1P63158 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb1P63158 Gm43225-201ENSMUST00000201381 1439 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm45520-201ENSMUST00000210109 2031 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC8.82□□□□□ -1
Hmgb1P63158 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb1P63158 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb1P63158 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb1P63158 Ighv2-4-201ENSMUST00000103447 350 ntAPPRIS P1 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm22927-201ENSMUST00000104268 131 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Hmgb1P63158 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm5319-201ENSMUST00000118965 873 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Gm11676-201ENSMUST00000120443 490 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC8.82□□□□□ -1
Hmgb1P63158 Clec4e-207ENSMUST00000177367 729 ntAPPRIS ALT2 TSL 3 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm19705-201ENSMUST00000180495 496 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm18353-201ENSMUST00000185906 784 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Gm29548-201ENSMUST00000187012 694 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Gm28105-201ENSMUST00000187788 694 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm18698-201ENSMUST00000192327 668 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Gm37450-201ENSMUST00000195218 170 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Gm43646-201ENSMUST00000199962 464 ntTSL 3 BASIC8.82□□□□□ -1
Hmgb1P63158 Gm44721-201ENSMUST00000206978 472 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Gm44623-201ENSMUST00000207934 434 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC8.82□□□□□ -1
Hmgb1P63158 AC122360.1-201ENSMUST00000217737 624 ntBASIC8.82□□□□□ -1
Hmgb1P63158 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC8.82□□□□□ -1
Hmgb1P63158 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.82□□□□□ -1
Hmgb1P63158 AC154249.1-201ENSMUST00000226296 320 ntBASIC8.82□□□□□ -1
Hmgb1P63158 AC154640.1-204ENSMUST00000227105 648 ntBASIC8.82□□□□□ -1
Hmgb1P63158 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms