Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Gm12919-201ENSMUST00000119855 1594 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Gm45210-201ENSMUST00000206401 1577 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Ktn1-210ENSMUST00000187839 7945 ntAPPRIS P3 TSL 5 BASIC8.53□□□□□ -1.04
Tpm1P58771 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC8.53□□□□□ -1.04
Tpm1P58771 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Tpm1P58771 Olfr93-203ENSMUST00000219235 2929 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Tpm1P58771 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Tpm1P58771 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Gm12460-201ENSMUST00000117147 357 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Gm11922-201ENSMUST00000118967 475 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Gm5761-201ENSMUST00000119238 834 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Gm11763-201ENSMUST00000119964 312 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Gm14528-201ENSMUST00000120615 231 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Gm12692-201ENSMUST00000121092 546 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Gm4473-201ENSMUST00000145987 657 ntTSL 2 BASIC8.53□□□□□ -1.04
Tpm1P58771 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.53□□□□□ -1.04
Tpm1P58771 Gm20452-201ENSMUST00000174686 513 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Gm5696-201ENSMUST00000189850 552 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Gm37904-201ENSMUST00000195591 312 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC8.53□□□□□ -1.04
Tpm1P58771 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Gm6329-201ENSMUST00000209210 936 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 AC154747.2-201ENSMUST00000225109 780 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 CT025618.1-201ENSMUST00000227409 1279 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Vmn1r90-204ENSMUST00000226802 7185 ntAPPRIS P2 BASIC8.53□□□□□ -1.04
Tpm1P58771 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Tpm1P58771 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 AC135119.1-202ENSMUST00000228435 2203 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Ogdh-203ENSMUST00000093350 4075 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Tpm1P58771 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Tpm1P58771 Alpk1-206ENSMUST00000198955 4498 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Tpm1P58771 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC8.52□□□□□ -1.04
Tpm1P58771 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
Tpm1P58771 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
Tpm1P58771 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 Gm44101-201ENSMUST00000203951 2221 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 Gm16334-201ENSMUST00000159488 694 ntTSL 3 BASIC8.52□□□□□ -1.05
Tpm1P58771 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Tpm1P58771 Gm23413-201ENSMUST00000175521 125 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC8.52□□□□□ -1.05
Tpm1P58771 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 Gm37450-201ENSMUST00000195218 170 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC8.52□□□□□ -1.05
Tpm1P58771 Gm42964-201ENSMUST00000202965 382 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Olfr326-ps1-201ENSMUST00000204790 392 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 Gm42402-201ENSMUST00000208341 1054 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Gm44833-201ENSMUST00000208368 331 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 CT025685.1-201ENSMUST00000213716 150 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 AC167013.6-201ENSMUST00000226587 1067 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 n-R5s74-201ENSMUST00000082654 116 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
Tpm1P58771 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 Ceacam1-203ENSMUST00000098669 2873 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
Tpm1P58771 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 AC153143.1-201ENSMUST00000222966 1340 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Tpm1P58771 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Tpm1P58771 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.52□□□□□ -1.05
Tpm1P58771 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Tpm1P58771 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Tpm1P58771 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Tpm1P58771 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Tpm1P58771 N4bp2-204ENSMUST00000201489 9055 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Tpm1P58771 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.51□□□□□ -1.05
Tpm1P58771 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 68 ms