Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 AC115744.1-201ENSMUST00000222398 2379 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Cct7-203ENSMUST00000204592 1544 ntTSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Wdr12-203ENSMUST00000122038 2850 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Dynlt3-201ENSMUST00000033519 2176 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Olfr381-203ENSMUST00000214623 2656 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Prnd-204ENSMUST00000110172 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Fignl1-206ENSMUST00000171080 2844 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Btbd16-204ENSMUST00000208593 1849 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Abca8a-201ENSMUST00000046223 5614 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Olfr1564-203ENSMUST00000213642 5271 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Olfr1564-205ENSMUST00000215450 5281 ntAPPRIS ALT1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Ikbke-201ENSMUST00000062108 3251 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 4930444A19Rik-201ENSMUST00000188243 2117 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm14273-201ENSMUST00000136315 1786 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Zfp667-205ENSMUST00000170776 3685 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 AC132474.1-201ENSMUST00000214407 3686 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm37949-201ENSMUST00000192808 2091 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC8.08□□□□□ -1.12
Hoxd9P28357 1700034E13Rik-202ENSMUST00000118724 490 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm11407-201ENSMUST00000120362 1058 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 n-R5s43-201ENSMUST00000122739 110 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm14260-201ENSMUST00000125121 260 ntTSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm25551-201ENSMUST00000158082 103 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm25767-201ENSMUST00000158572 124 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm23823-201ENSMUST00000158740 124 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm16585-201ENSMUST00000161442 610 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm4287-201ENSMUST00000174329 585 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21762-201ENSMUST00000177561 456 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21756-201ENSMUST00000178380 930 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21405-201ENSMUST00000179024 930 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Mir8110-201ENSMUST00000183771 97 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm29299-201ENSMUST00000185609 923 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm29453-201ENSMUST00000186428 1279 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21191-201ENSMUST00000186484 930 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm28156-201ENSMUST00000187880 1136 ntTSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm28477-201ENSMUST00000188125 406 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm5696-201ENSMUST00000189850 552 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm29573-201ENSMUST00000190291 919 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm29503-201ENSMUST00000191044 930 ntBASIC8.08□□□□□ -1.12
Hoxd9P28357 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms