Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Mir6919-201ENSMUST00000185146 62 ntBASIC6.88□□□□□ -1.31
P20040 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC6.88□□□□□ -1.31
P20040 Gm42667-201ENSMUST00000196132 234 ntBASIC6.88□□□□□ -1.31
P20040 Gm43743-201ENSMUST00000197898 697 ntBASIC6.88□□□□□ -1.31
P20040 Gm43235-201ENSMUST00000200121 297 ntBASIC6.88□□□□□ -1.31
P20040 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC6.88□□□□□ -1.31
P20040 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC6.88□□□□□ -1.31
P20040 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC6.88□□□□□ -1.31
P20040 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC6.88□□□□□ -1.31
P20040 Gm9689-201ENSMUST00000210009 428 ntBASIC6.88□□□□□ -1.31
P20040 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 AC158799.1-201ENSMUST00000214686 617 ntTSL 5 BASIC6.88□□□□□ -1.31
P20040 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC6.88□□□□□ -1.31
P20040 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.88□□□□□ -1.31
P20040 AC122533.2-201ENSMUST00000223772 545 ntBASIC6.88□□□□□ -1.31
P20040 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
P20040 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
P20040 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC6.88□□□□□ -1.31
P20040 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
P20040 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
P20040 Camk2d-205ENSMUST00000106401 3059 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
P20040 Pogz-201ENSMUST00000042402 4775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Gm21152-201ENSMUST00000190271 3483 ntBASIC6.87□□□□□ -1.31
P20040 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.87□□□□□ -1.31
P20040 Gm15624-201ENSMUST00000145420 1405 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
P20040 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.87□□□□□ -1.31
P20040 Gm13573-201ENSMUST00000116410 631 ntBASIC6.87□□□□□ -1.31
P20040 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Gm12361-201ENSMUST00000119806 1044 ntBASIC6.87□□□□□ -1.31
P20040 Gm13358-201ENSMUST00000121427 569 ntBASIC6.87□□□□□ -1.31
P20040 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
P20040 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC6.87□□□□□ -1.31
P20040 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm9399-201ENSMUST00000175771 639 ntBASIC6.87□□□□□ -1.31
P20040 Gm26736-201ENSMUST00000180425 1236 ntBASIC6.87□□□□□ -1.31
P20040 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm37247-201ENSMUST00000192549 730 ntBASIC6.87□□□□□ -1.31
P20040 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Gm17835-201ENSMUST00000196870 499 ntBASIC6.87□□□□□ -1.31
P20040 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC6.87□□□□□ -1.31
P20040 Gm23604-202ENSMUST00000198428 137 ntBASIC6.87□□□□□ -1.31
P20040 Gm17977-201ENSMUST00000198743 574 ntBASIC6.87□□□□□ -1.31
P20040 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC6.87□□□□□ -1.31
P20040 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
P20040 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC6.87□□□□□ -1.31
P20040 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
P20040 Gm10155-201ENSMUST00000084598 483 ntBASIC6.87□□□□□ -1.31
P20040 Gm5614-201ENSMUST00000091097 318 ntBASIC6.87□□□□□ -1.31
P20040 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.87□□□□□ -1.31
P20040 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
P20040 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
P20040 Pikfyve-201ENSMUST00000081154 11237 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Gm36879-201ENSMUST00000212313 2060 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.87□□□□□ -1.31
P20040 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
P20040 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Gm6819-201ENSMUST00000185325 1891 ntBASIC6.87□□□□□ -1.31
P20040 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC6.87□□□□□ -1.31
P20040 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
P20040 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms