Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 2410137M14Rik-202ENSMUST00000173707 724 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm9476-201ENSMUST00000179109 696 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm7577-201ENSMUST00000182543 982 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm5327-201ENSMUST00000182864 1009 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm6931-202ENSMUST00000183137 1009 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gm8596-201ENSMUST00000188004 792 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 1700022H16Rik-201ENSMUST00000188935 476 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Pisrt1-201ENSMUST00000195532 515 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm17910-201ENSMUST00000211038 838 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Rps7-ps1-201ENSMUST00000211928 391 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 AC123944.1-201ENSMUST00000213414 160 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm32089-201ENSMUST00000221222 1193 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm10054-201ENSMUST00000223362 431 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 AC140462.1-201ENSMUST00000225776 853 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 AC167013.3-201ENSMUST00000228110 989 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Fam209-201ENSMUST00000029007 698 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gsta4-201ENSMUST00000034903 977 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Tex47-201ENSMUST00000088796 1085 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Cdx1P18111 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Cdx1P18111 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm7364-201ENSMUST00000188760 1501 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm37863-201ENSMUST00000194911 1457 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Gm4275-205ENSMUST00000212624 1436 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.33□□□□□ -1.4
Cdx1P18111 Ccser2-209ENSMUST00000183038 1681 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Cdx1P18111 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Cdx1P18111 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Nox1-201ENSMUST00000033610 2563 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Rnf125-201ENSMUST00000050004 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm23192-201ENSMUST00000102434 96 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gm13673-201ENSMUST00000122056 531 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gm22342-201ENSMUST00000122647 298 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 n-R5s43-201ENSMUST00000122739 110 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Fam229b-204ENSMUST00000134279 700 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
Cdx1P18111 Kcnab3os-201ENSMUST00000136196 566 ntTSL 3 BASIC6.32□□□□□ -1.4
Cdx1P18111 Fam229b-207ENSMUST00000137132 663 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdx1P18111 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm11999-201ENSMUST00000145789 813 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm16235-201ENSMUST00000146132 342 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx1P18111 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC6.32□□□□□ -1.4
Cdx1P18111 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm6919-201ENSMUST00000180049 483 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm26436-201ENSMUST00000180325 132 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm17800-201ENSMUST00000182466 971 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gm28478-201ENSMUST00000185802 183 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Cysrt1-203ENSMUST00000186719 909 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm29441-201ENSMUST00000191584 211 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gm6236-201ENSMUST00000193785 1009 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gm42964-201ENSMUST00000202965 382 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gm19172-201ENSMUST00000203170 1246 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gm45554-201ENSMUST00000210731 1004 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx1P18111 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx1P18111 Olfr977-ps1-201ENSMUST00000217438 943 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx1P18111 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 AC124103.1-201ENSMUST00000227564 1027 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gm5590-201ENSMUST00000059110 345 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Olfr1178-201ENSMUST00000075640 972 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm8394-201ENSMUST00000079684 952 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx1P18111 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm38315-201ENSMUST00000194286 2437 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm37347-201ENSMUST00000193969 3071 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Cdx1P18111 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
Cdx1P18111 2610037D02Rik-202ENSMUST00000185067 2997 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC6.32□□□□□ -1.4
Cdx1P18111 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.32□□□□□ -1.4
Cdx1P18111 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Cdx1P18111 Kcne4-202ENSMUST00000187432 1813 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 113.1 ms