Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm34923-201ENSMUST00000222673 5043 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Clasp1-220ENSMUST00000191445 4914 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Nedd4-209ENSMUST00000184450 3329 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Myo15-202ENSMUST00000081823 7953 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm13260-201ENSMUST00000117797 1264 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm6921-201ENSMUST00000161478 435 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm29144-201ENSMUST00000189235 339 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm29238-201ENSMUST00000189709 695 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm28607-201ENSMUST00000190142 339 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm28121-201ENSMUST00000191420 339 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm37017-201ENSMUST00000195266 747 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm31831-201ENSMUST00000196240 684 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc180J3QNE4 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm45509-201ENSMUST00000209624 1229 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm45506-201ENSMUST00000211620 280 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm6887-201ENSMUST00000080945 482 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm37995-201ENSMUST00000194958 1714 ntBASIC14□□□□□ -0.17
Ccdc180J3QNE4 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc180J3QNE4 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm29220-201ENSMUST00000185862 1501 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Gm28966-201ENSMUST00000188951 1501 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Anpep-202ENSMUST00000107392 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Rbpj-208ENSMUST00000201912 5485 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Gm26480-201ENSMUST00000122619 297 ntBASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Gm29354-201ENSMUST00000187613 696 ntBASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 AC151901.1-201ENSMUST00000218274 180 ntBASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Dysf-203ENSMUST00000113818 6571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Gm29113-201ENSMUST00000185991 3432 ntBASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Cdc40-201ENSMUST00000044166 3534 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Ccdc180J3QNE4 Nek6-201ENSMUST00000054234 10338 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Tdrd1-204ENSMUST00000121249 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Gm23187-201ENSMUST00000175746 86 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Gm5261-201ENSMUST00000185860 713 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Gm8539-201ENSMUST00000199822 501 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Gm45478-201ENSMUST00000209472 211 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 CT030166.4-201ENSMUST00000220640 404 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Cabyr-204ENSMUST00000121018 1305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Ifit1-201ENSMUST00000102824 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Rtel1-204ENSMUST00000108814 4322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Ppfia1-202ENSMUST00000182226 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 AC091783.1-201ENSMUST00000223614 1613 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Nav2-216ENSMUST00000184945 10665 ntAPPRIS P4 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Gm8421-201ENSMUST00000119439 305 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Gm16276-201ENSMUST00000131218 262 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Gm7972-201ENSMUST00000208434 1137 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 AC144783.1-201ENSMUST00000219103 960 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 AC124103.1-201ENSMUST00000227564 1027 ntBASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Pla2g4d-201ENSMUST00000094665 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Ccdc180J3QNE4 Srgap1-202ENSMUST00000081688 7787 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms