Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm38200-201ENSMUST00000192083 2111 ntBASIC7.88□□□□□ -1.15
Col4a6B1AVK5 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Fmr1os-201ENSMUST00000181533 2743 ntTSL 2 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 CT025639.1-201ENSMUST00000223906 1375 ntBASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Gm10302-201ENSMUST00000174433 3535 ntBASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Tnfsf18-201ENSMUST00000086084 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Col4a6B1AVK5 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Ap3m2-204ENSMUST00000210656 3373 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm25379-201ENSMUST00000104338 114 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm26144-201ENSMUST00000104475 132 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm17170-201ENSMUST00000112785 316 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm16138-201ENSMUST00000159341 821 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm28885-201ENSMUST00000185615 563 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm18907-201ENSMUST00000209719 932 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 AV026068-219ENSMUST00000224148 933 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 AC154515.3-201ENSMUST00000225081 1159 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm16536-201ENSMUST00000162209 1589 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm38099-201ENSMUST00000193280 3170 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 AC061963.2-201ENSMUST00000213541 2739 ntBASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Ndst2-205ENSMUST00000225000 3661 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
Col4a6B1AVK5 Gm43196-201ENSMUST00000201762 2114 ntBASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Aplnr-201ENSMUST00000057019 3699 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Gm8046-201ENSMUST00000172151 616 ntBASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Mir8105-201ENSMUST00000184718 89 ntBASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Gm43595-201ENSMUST00000196464 1071 ntBASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Gm18593-201ENSMUST00000200754 1139 ntBASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Clec2g-206ENSMUST00000204259 893 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Gm17822-201ENSMUST00000204307 351 ntBASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 CT009556.4-201ENSMUST00000227092 200 ntBASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Olfr978-202ENSMUST00000217600 1790 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
Col4a6B1AVK5 Cacna1d-204ENSMUST00000223803 6435 ntAPPRIS ALT2 BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms