Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm37100-201ENSMUST00000193344 1353 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Trp63-206ENSMUST00000115307 1782 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Cenpn-201ENSMUST00000034205 1768 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm12481-201ENSMUST00000102482 297 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Igkv11-106-201ENSMUST00000103331 346 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm17132-201ENSMUST00000109542 1158 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Ptgds-202ENSMUST00000114251 830 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm14777-201ENSMUST00000116306 176 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm7206-201ENSMUST00000117730 508 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Rps10-ps4-201ENSMUST00000120308 492 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm14673-201ENSMUST00000121973 746 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm12751-201ENSMUST00000122336 381 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm12841-201ENSMUST00000128263 338 ntTSL 2 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Myhas-201ENSMUST00000137662 787 ntTSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm23587-201ENSMUST00000157658 84 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Mir2139-201ENSMUST00000158669 95 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Atp2b4-208ENSMUST00000167348 243 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Vmn1r-ps75-201ENSMUST00000174316 920 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm16456-201ENSMUST00000174431 920 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm25145-201ENSMUST00000177640 110 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm24754-201ENSMUST00000177997 107 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm10591-201ENSMUST00000178168 402 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Ccl21b-202ENSMUST00000178864 402 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm7481-201ENSMUST00000182020 995 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm28235-201ENSMUST00000185828 1120 ntTSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm29586-202ENSMUST00000186478 1136 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Tspy-ps-203ENSMUST00000186546 989 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm28969-204ENSMUST00000186554 1136 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm28990-206ENSMUST00000190416 1136 ntTSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm29218-208ENSMUST00000191419 1136 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 4930553I04Rik-201ENSMUST00000196722 670 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm4859-201ENSMUST00000199625 787 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm30557-201ENSMUST00000203764 349 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm43884-201ENSMUST00000204251 559 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm18192-201ENSMUST00000210174 941 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm39164-202ENSMUST00000211519 236 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm36539-201ENSMUST00000217543 497 ntTSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Prune2-207ENSMUST00000225351 2115 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 AC154738.2-201ENSMUST00000227403 1110 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Reg4-201ENSMUST00000029469 1021 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Arpc3-201ENSMUST00000031421 736 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Mylpf-201ENSMUST00000032910 766 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Ankrd6-201ENSMUST00000035719 4683 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Cd48-202ENSMUST00000068584 1186 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gstp3-201ENSMUST00000076451 685 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm24145-201ENSMUST00000082631 163 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 4933423L19Rik-201ENSMUST00000208432 1464 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm44553-201ENSMUST00000206316 2037 ntBASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Ift46-202ENSMUST00000118186 1317 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Pou2f1-201ENSMUST00000027850 2258 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Trim39Q9ESN2 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Pax4-201ENSMUST00000031718 1370 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Spag9-204ENSMUST00000092777 6913 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Ttc26-205ENSMUST00000162554 4195 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Olfr806-203ENSMUST00000215142 3108 ntAPPRIS P1 TSL 3 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm18493-201ENSMUST00000192084 1612 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Gm37067-201ENSMUST00000195730 1628 ntBASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Trim39Q9ESN2 Pcdhb15-201ENSMUST00000050034 2801 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms