Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 AC101205.1-201ENSMUST00000227916 907 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Dnajc5b-201ENSMUST00000029132 923 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Baz2a-202ENSMUST00000170054 8372 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Baz2a-201ENSMUST00000045621 8369 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Lipf-201ENSMUST00000025680 1411 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Alkbh1-209ENSMUST00000162961 3857 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm16487-201ENSMUST00000105048 4037 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm26920-201ENSMUST00000182746 2374 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm43623-201ENSMUST00000199289 2663 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Oca2-201ENSMUST00000032633 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gem-201ENSMUST00000029868 1994 ntAPPRIS P1 TSL 2 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Apol11b-202ENSMUST00000180949 2261 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm42595-201ENSMUST00000196771 1607 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Ighv1-31-201ENSMUST00000103511 294 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Ighv1-37-201ENSMUST00000103514 348 ntAPPRIS ALT2 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Ighv1-42-201ENSMUST00000103516 294 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Ighv1-43-201ENSMUST00000103517 294 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Ighv1-66-201ENSMUST00000103537 399 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Ighv1-75-201ENSMUST00000103544 373 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm11653-201ENSMUST00000119992 1009 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm24893-201ENSMUST00000122745 369 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm16147-201ENSMUST00000162143 373 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm7651-201ENSMUST00000173398 901 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm5698-201ENSMUST00000178317 724 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm21181-201ENSMUST00000186249 330 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 1700034J04Rik-201ENSMUST00000192736 750 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Ighv1-29-201ENSMUST00000194116 342 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm37843-201ENSMUST00000195213 2639 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm37962-201ENSMUST00000195535 2034 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm42752-201ENSMUST00000198394 1106 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm43558-201ENSMUST00000200155 210 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm19253-201ENSMUST00000204279 307 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 AC238940.2-201ENSMUST00000224202 330 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 AC131117.2-202ENSMUST00000224539 547 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Ak7-201ENSMUST00000040876 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Klra7-202ENSMUST00000049304 1075 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Naip1-201ENSMUST00000022142 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC9.86□□□□□ -0.83
RtcbQ99LF4 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Stxbp5l-205ENSMUST00000114782 3996 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Rab23-202ENSMUST00000115174 4218 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Cpa5-203ENSMUST00000115139 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Mep1a-201ENSMUST00000024707 2921 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
RtcbQ99LF4 Napepld-201ENSMUST00000060899 3724 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gprc5c-202ENSMUST00000053361 3667 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Mcm7-201ENSMUST00000000505 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Sept3-201ENSMUST00000023095 4731 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Wdr59-203ENSMUST00000211981 3618 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 AC154171.3-201ENSMUST00000224519 2505 ntBASIC9.85□□□□□ -0.83
RtcbQ99LF4 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Sars-201ENSMUST00000090553 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Adgrg1-201ENSMUST00000093271 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm25614-201ENSMUST00000104013 133 ntBASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm25631-201ENSMUST00000104390 130 ntBASIC9.85□□□□□ -0.83
RtcbQ99LF4 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm12265-201ENSMUST00000139025 468 ntTSL 2 BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
RtcbQ99LF4 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC9.85□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms