Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Clrn1Q8K445 Gm28945-201ENSMUST00000187780 2165 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Clrn1Q8K445 Gm29622-201ENSMUST00000190914 2165 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Clrn1Q8K445 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Clrn1Q8K445 Csde1-216ENSMUST00000199571 3123 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Clrn1Q8K445 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Clrn1Q8K445 Gc-201ENSMUST00000049209 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
Clrn1Q8K445 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 AC130219.1-201ENSMUST00000228406 3433 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm16409-201ENSMUST00000100510 747 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm23946-201ENSMUST00000104423 197 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Fgf2-203ENSMUST00000108120 526 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm41-201ENSMUST00000116183 1023 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm13573-201ENSMUST00000116410 631 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm15154-201ENSMUST00000117590 366 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm13160-201ENSMUST00000118441 627 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm12459-201ENSMUST00000120659 356 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm9143-201ENSMUST00000120745 745 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm8172-201ENSMUST00000120762 750 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm15192-201ENSMUST00000121005 293 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm14830-201ENSMUST00000121899 700 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm23497-201ENSMUST00000157738 130 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm16184-201ENSMUST00000162324 573 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm10182-201ENSMUST00000178676 273 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm26736-201ENSMUST00000180425 1236 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm17977-201ENSMUST00000198743 574 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm43222-201ENSMUST00000199013 603 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm44151-201ENSMUST00000204704 259 ntTSL 3 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 AC125543.2-201ENSMUST00000222114 105 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 AC158536.1-201ENSMUST00000222510 256 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 CT030170.7-201ENSMUST00000223372 103 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 AV026068-225ENSMUST00000225042 490 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 AC117949.2-201ENSMUST00000225900 584 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 CT025538.2-201ENSMUST00000226083 772 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Nr1h5-203ENSMUST00000196983 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Anapc15-210ENSMUST00000144207 3103 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC7.46□□□□□ -1.22
Clrn1Q8K445 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
Clrn1Q8K445 4932415M13Rik-202ENSMUST00000184645 3063 ntTSL 2 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC7.46□□□□□ -1.22
Clrn1Q8K445 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm17130-201ENSMUST00000201542 2683 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Cherp-201ENSMUST00000079510 3713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm37980-201ENSMUST00000194420 1910 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm4919-201ENSMUST00000117825 604 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm14485-201ENSMUST00000119489 493 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm12687-201ENSMUST00000119752 706 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm11901-201ENSMUST00000120412 437 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm12499-201ENSMUST00000121961 546 ntBASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC7.45□□□□□ -1.22
Clrn1Q8K445 Gm23207-201ENSMUST00000158665 102 ntBASIC7.45□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms