Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Gm23094-201ENSMUST00000157551 322 ntBASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Gm24824-201ENSMUST00000175097 78 ntBASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 AI506816-201ENSMUST00000197153 474 ntTSL 5 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Anxa9-201ENSMUST00000015846 1851 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Deup1-201ENSMUST00000045513 2583 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Cchcr1Q8K2I2 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 CAAA01216754.1-201ENSMUST00000215882 1836 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm45634-201ENSMUST00000209736 1990 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm12838-201ENSMUST00000116278 325 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm14450-201ENSMUST00000119984 240 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm25842-201ENSMUST00000122590 322 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Dtx3-205ENSMUST00000137151 346 ntTSL 3 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Vmn2r-ps31-201ENSMUST00000176474 760 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm27288-201ENSMUST00000184215 80 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm27597-201ENSMUST00000184365 80 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Mir6912-201ENSMUST00000184456 70 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm27506-201ENSMUST00000184558 80 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm27529-201ENSMUST00000184975 80 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm27907-201ENSMUST00000185101 80 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm8307-201ENSMUST00000187682 1150 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm17835-201ENSMUST00000196870 499 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm27680-202ENSMUST00000199221 807 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm42603-201ENSMUST00000199893 2146 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm4259-201ENSMUST00000206489 758 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm34006-201ENSMUST00000213985 655 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 AC161374.2-201ENSMUST00000223662 596 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 AC162940.1-201ENSMUST00000224745 1167 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm7086-202ENSMUST00000228849 506 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm5590-201ENSMUST00000059110 345 ntBASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Cchcr1Q8K2I2 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm42771-201ENSMUST00000198342 2486 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm37457-201ENSMUST00000193639 2433 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Cep57l1-209ENSMUST00000189770 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm5228-201ENSMUST00000117186 357 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm14824-201ENSMUST00000119421 737 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm13683-201ENSMUST00000119497 1076 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm12993-201ENSMUST00000119900 479 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm14826-201ENSMUST00000121284 901 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Gm8865-201ENSMUST00000125697 430 ntBASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cchcr1Q8K2I2 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms