Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm18033-201ENSMUST00000186678 550 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm8307-201ENSMUST00000187682 1150 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm43815-201ENSMUST00000197676 990 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm5314-201ENSMUST00000204852 466 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm45672-201ENSMUST00000209700 768 ntTSL 3 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 AC126805.1-201ENSMUST00000225142 262 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 AC131100.1-201ENSMUST00000226328 470 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm16391-201ENSMUST00000086601 447 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Gm43161-201ENSMUST00000197020 1688 ntBASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Vps53Q8CCB4 Afap1l2-201ENSMUST00000111584 3597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Olfr314-202ENSMUST00000205189 2647 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Glra4-201ENSMUST00000018739 1831 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Vps53Q8CCB4 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Skint7-204ENSMUST00000163281 1423 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 AC159624.1-201ENSMUST00000217762 1344 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm12517-201ENSMUST00000122082 425 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm11496-201ENSMUST00000128078 581 ntTSL 2 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm12243-201ENSMUST00000128521 821 ntTSL 3 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Milr1-203ENSMUST00000147326 1234 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm23958-201ENSMUST00000157207 105 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm24994-201ENSMUST00000157414 121 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm17235-201ENSMUST00000169128 964 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm8304-201ENSMUST00000185744 584 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Chil5-203ENSMUST00000200146 1296 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm5307-201ENSMUST00000204772 760 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 AC122533.2-201ENSMUST00000223772 545 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 AC207128.2-202ENSMUST00000224010 808 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Nyap2-205ENSMUST00000137862 3393 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm44417-201ENSMUST00000203298 3359 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Gm5681-201ENSMUST00000189217 1533 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 4933406L23Rik-201ENSMUST00000203567 1509 ntBASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Vps53Q8CCB4 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Wdr27-206ENSMUST00000228330 2759 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Olfr370-202ENSMUST00000209408 4600 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm24284-201ENSMUST00000104240 142 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm24738-201ENSMUST00000158856 123 ntBASIC9.13□□□□□ -0.95
Vps53Q8CCB4 Gm6921-201ENSMUST00000161478 435 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms