Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Supt20-202ENSMUST00000170552 1968 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Sla-202ENSMUST00000164163 2952 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm44986-201ENSMUST00000206292 2829 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 AC153862.1-201ENSMUST00000215700 3349 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Olfr152-203ENSMUST00000215394 2172 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cdx4Q07424 AC154482.1-201ENSMUST00000223248 2483 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 4932413F04Rik-201ENSMUST00000190332 2765 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm38130-201ENSMUST00000194311 1761 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm26344-201ENSMUST00000104553 132 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm13683-201ENSMUST00000119497 1076 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm5883-201ENSMUST00000120735 495 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm13674-201ENSMUST00000121276 823 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm25295-201ENSMUST00000122794 306 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm16031-201ENSMUST00000153253 448 ntTSL 2 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm26184-201ENSMUST00000157686 131 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm8065-201ENSMUST00000164048 605 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Prr13-202ENSMUST00000164688 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Mir7011-201ENSMUST00000183768 73 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm18970-201ENSMUST00000186040 938 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm37371-201ENSMUST00000194837 392 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm42945-202ENSMUST00000197523 537 ntTSL 2 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm45509-201ENSMUST00000209624 1229 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm19269-201ENSMUST00000211401 804 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 RMST_1.1-204ENSMUST00000217871 699 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdx4Q07424 4930407I19Rik-201ENSMUST00000220265 923 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm17611-202ENSMUST00000220613 814 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 CT009546.3-201ENSMUST00000220914 208 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 AC125350.5-201ENSMUST00000226102 517 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm14267-208ENSMUST00000228324 1189 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm4871-201ENSMUST00000071421 1119 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Olfr319-201ENSMUST00000076965 921 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Pilrb2-201ENSMUST00000164886 1807 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm28649-201ENSMUST00000189153 1581 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Ube2v1-201ENSMUST00000060645 1586 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm43917-201ENSMUST00000191984 2360 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm44737-201ENSMUST00000206950 2355 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm1982-201ENSMUST00000188615 1887 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm43420-201ENSMUST00000198012 1857 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 AC159002.2-201ENSMUST00000228843 4874 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm38947-201ENSMUST00000209940 2720 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm27166-201ENSMUST00000184476 1930 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm45873-201ENSMUST00000211865 1915 ntBASIC6.17□□□□□ -1.42
Cdx4Q07424 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx4Q07424 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdx4Q07424 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx4Q07424 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx4Q07424 AC130219.1-201ENSMUST00000228406 3433 ntBASIC6.16□□□□□ -1.42
Cdx4Q07424 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx4Q07424 Cd36-206ENSMUST00000197890 2564 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx4Q07424 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx4Q07424 Umps-201ENSMUST00000023510 3484 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx4Q07424 5430401H09Rik-202ENSMUST00000218836 2620 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx4Q07424 D7Ertd443e-201ENSMUST00000094002 2908 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Cdx4Q07424 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx4Q07424 AC153955.2-201ENSMUST00000216739 4129 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx4Q07424 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx4Q07424 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx4Q07424 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx4Q07424 Slc13a1-201ENSMUST00000031713 2495 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms