Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Nphp4P59240 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Plec-217ENSMUST00000169438 14827 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Gm19031-201ENSMUST00000176280 1365 ntBASIC10.43□□□□□ -0.74
Nphp4P59240 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Gm37199-201ENSMUST00000193881 4065 ntBASIC10.43□□□□□ -0.74
Nphp4P59240 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Rimbp2-201ENSMUST00000111346 4264 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Nphp4P59240 Grik2-201ENSMUST00000079751 2610 ntTSL 2 BASIC10.43□□□□□ -0.74
Nphp4P59240 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC10.43□□□□□ -0.74
Nphp4P59240 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Nphp4P59240 Gm43430-201ENSMUST00000196513 3897 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nphp4P59240 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nphp4P59240 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 AC123705.1-201ENSMUST00000222512 2058 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 Gm3611-201ENSMUST00000173687 877 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 Gm23139-201ENSMUST00000179454 132 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 Trav6d-4-202ENSMUST00000183820 338 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Nphp4P59240 Gm18501-201ENSMUST00000185363 664 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nphp4P59240 Gm28528-201ENSMUST00000188560 857 ntTSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 Gm38254-201ENSMUST00000192276 1009 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 Gm45478-201ENSMUST00000209472 211 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 CT025685.1-201ENSMUST00000213716 150 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC10.42□□□□□ -0.74
Nphp4P59240 CT009550.2-201ENSMUST00000228851 399 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Nphp4P59240 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Nphp4P59240 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 5430419D17Rik-203ENSMUST00000208921 7948 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC10.42□□□□□ -0.74
Nphp4P59240 Pkd1l2-201ENSMUST00000098375 7386 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 Gm42973-201ENSMUST00000197913 3200 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 AC153962.2-202ENSMUST00000219391 1382 ntTSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 Anks1b-201ENSMUST00000099364 1383 ntTSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nphp4P59240 Zscan26-201ENSMUST00000032820 3918 ntTSL 3 BASIC10.42□□□□□ -0.74
Nphp4P59240 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Nphp4P59240 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nphp4P59240 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nphp4P59240 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Nphp4P59240 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Nphp4P59240 Gm43684-201ENSMUST00000199279 6573 ntBASIC10.42□□□□□ -0.74
Nphp4P59240 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nphp4P59240 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Nphp4P59240 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm11371-201ENSMUST00000120294 385 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 Gm5135-201ENSMUST00000121100 573 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm2735-201ENSMUST00000136133 277 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm24442-201ENSMUST00000157238 327 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 Gm16110-201ENSMUST00000161473 892 ntTSL 3 BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm24300-201ENSMUST00000177809 109 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 Gm24017-201ENSMUST00000178726 109 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 Gm23952-201ENSMUST00000179380 109 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm34583-203ENSMUST00000202586 454 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC10.41□□□□□ -0.74
Nphp4P59240 AC155834.1-201ENSMUST00000220033 498 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 AC157212.1-201ENSMUST00000228398 1075 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm45201-201ENSMUST00000207187 2679 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm8798-202ENSMUST00000213048 2357 ntTSL 5 BASIC10.41□□□□□ -0.74
Nphp4P59240 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm18537-202ENSMUST00000206215 1503 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm37891-201ENSMUST00000195585 1326 ntBASIC10.41□□□□□ -0.74
Nphp4P59240 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Nphp4P59240 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC10.41□□□□□ -0.74
Nphp4P59240 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Nphp4P59240 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nphp4P59240 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms