Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC8.55□□□□□ -1.04
Tpm1P58771 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Tpm1P58771 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Tpm1P58771 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Tpm1P58771 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC8.55□□□□□ -1.04
Tpm1P58771 Gps2-203ENSMUST00000116358 1159 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.55□□□□□ -1.04
Tpm1P58771 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC8.55□□□□□ -1.04
Tpm1P58771 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Tpm1P58771 Gm22649-201ENSMUST00000175134 298 ntBASIC8.55□□□□□ -1.04
Tpm1P58771 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
Tpm1P58771 Pea15b-202ENSMUST00000183185 555 ntBASIC8.55□□□□□ -1.04
Tpm1P58771 Gm24362-201ENSMUST00000183220 416 ntBASIC8.55□□□□□ -1.04
Tpm1P58771 Krtap6-3-202ENSMUST00000185581 520 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Tpm1P58771 Olfr10-201ENSMUST00000187570 942 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Tpm1P58771 Olfr1392-201ENSMUST00000189851 1018 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Tpm1P58771 Spata45-202ENSMUST00000192151 443 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Tpm1P58771 Gm8388-201ENSMUST00000193000 756 ntBASIC8.55□□□□□ -1.04
Tpm1P58771 Gm37310-201ENSMUST00000195237 2968 ntBASIC8.55□□□□□ -1.04
Tpm1P58771 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC8.55□□□□□ -1.04
Tpm1P58771 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC8.55□□□□□ -1.04
Tpm1P58771 Krtap6-3-201ENSMUST00000079151 444 ntBASIC8.55□□□□□ -1.04
Tpm1P58771 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
Tpm1P58771 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC8.55□□□□□ -1.04
Tpm1P58771 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Tpm1P58771 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Tpm1P58771 Gm44117-201ENSMUST00000204442 1758 ntBASIC8.55□□□□□ -1.04
Tpm1P58771 Grip1-204ENSMUST00000105261 3608 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
Tpm1P58771 AC121286.2-201ENSMUST00000218069 2470 ntBASIC8.55□□□□□ -1.04
Tpm1P58771 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC8.55□□□□□ -1.04
Tpm1P58771 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
Tpm1P58771 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
Tpm1P58771 Ncoa2-202ENSMUST00000068304 8006 ntTSL 5 BASIC8.54□□□□□ -1.04
Tpm1P58771 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Tpm1P58771 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.54□□□□□ -1.04
Tpm1P58771 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Tpm1P58771 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Tpm1P58771 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm12904-201ENSMUST00000117451 1399 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Gm44834-201ENSMUST00000206671 1396 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm8662-201ENSMUST00000118644 574 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm14664-201ENSMUST00000142919 437 ntTSL 3 BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm22202-201ENSMUST00000158608 311 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC8.54□□□□□ -1.04
Tpm1P58771 Mir3100-201ENSMUST00000174918 65 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 1700065J18Rik-202ENSMUST00000190576 387 ntTSL 3 BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm42667-201ENSMUST00000196132 234 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Gm42525-201ENSMUST00000196257 527 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm17977-201ENSMUST00000198743 574 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Ighv8-16-201ENSMUST00000199258 294 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC8.54□□□□□ -1.04
Tpm1P58771 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm45481-201ENSMUST00000209717 877 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Gm8489-201ENSMUST00000209876 1152 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Gm3379-201ENSMUST00000222259 642 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 AC122354.1-201ENSMUST00000222328 702 ntTSL 5 BASIC8.54□□□□□ -1.04
Tpm1P58771 AC121357.1-201ENSMUST00000227365 608 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC8.54□□□□□ -1.04
Tpm1P58771 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Gm24696-201ENSMUST00000083878 134 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Tpm1P58771 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC8.54□□□□□ -1.04
Tpm1P58771 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC8.54□□□□□ -1.04
Tpm1P58771 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Tpm1P58771 Gm16072-201ENSMUST00000119574 2377 ntBASIC8.54□□□□□ -1.04
Tpm1P58771 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Tpm1P58771 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Tpm1P58771 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.53□□□□□ -1.04
Tpm1P58771 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms