Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Ttll6-201ENSMUST00000107680 3485 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
BdnfP21237 Gm43588-201ENSMUST00000201862 2298 ntBASIC7.63□□□□□ -1.19
BdnfP21237 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
BdnfP21237 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
BdnfP21237 Gm43331-201ENSMUST00000197991 1689 ntBASIC7.63□□□□□ -1.19
BdnfP21237 Gm21051-201ENSMUST00000221757 1688 ntBASIC7.63□□□□□ -1.19
BdnfP21237 CR974429.2-201ENSMUST00000221883 1696 ntBASIC7.63□□□□□ -1.19
BdnfP21237 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
BdnfP21237 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
BdnfP21237 Gm43322-201ENSMUST00000196232 1612 ntBASIC7.63□□□□□ -1.19
BdnfP21237 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
BdnfP21237 Gm7682-202ENSMUST00000202916 1582 ntAPPRIS P5 TSL 5 BASIC7.63□□□□□ -1.19
BdnfP21237 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
BdnfP21237 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Gm37403-201ENSMUST00000193775 3521 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
BdnfP21237 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm37520-201ENSMUST00000194883 2672 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
BdnfP21237 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
BdnfP21237 AC107452.3-201ENSMUST00000228807 1308 ntBASIC7.62□□□□□ -1.19
BdnfP21237 AC158988.1-201ENSMUST00000226731 2624 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
BdnfP21237 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.62□□□□□ -1.19
BdnfP21237 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Ccl20-202ENSMUST00000113437 794 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Gm13033-201ENSMUST00000117591 1057 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Gm14682-201ENSMUST00000117977 524 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Gm11585-201ENSMUST00000120901 569 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Gm11760-201ENSMUST00000122355 796 ntBASIC7.62□□□□□ -1.19
BdnfP21237 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm29145-201ENSMUST00000189914 456 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Gm8388-201ENSMUST00000193000 756 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Gm43013-201ENSMUST00000198216 247 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Gm42723-201ENSMUST00000199966 1044 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Gm6308-201ENSMUST00000203226 313 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm8767-201ENSMUST00000215786 1070 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm32834-202ENSMUST00000222417 655 ntTSL 3 BASIC7.62□□□□□ -1.19
BdnfP21237 9230112D13Rik-201ENSMUST00000022325 778 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 AC165281.1-201ENSMUST00000225713 1011 ntBASIC7.62□□□□□ -1.19
BdnfP21237 AC154718.1-201ENSMUST00000226676 250 ntBASIC7.62□□□□□ -1.19
BdnfP21237 CT571271.1-201ENSMUST00000227071 670 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm22830-201ENSMUST00000083772 130 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
BdnfP21237 Fxyd5-201ENSMUST00000009831 803 ntAPPRIS ALT2 TSL 3 BASIC7.62□□□□□ -1.19
BdnfP21237 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
BdnfP21237 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
BdnfP21237 Tpbpa-201ENSMUST00000021885 1621 ntAPPRIS P2 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Gimap6-202ENSMUST00000119315 3179 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.62□□□□□ -1.19
BdnfP21237 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
BdnfP21237 Tbx20-201ENSMUST00000052946 9091 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC7.61□□□□□ -1.19
BdnfP21237 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Gm45737-201ENSMUST00000208344 1612 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm8818-201ENSMUST00000110797 1047 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Gm12677-201ENSMUST00000118668 426 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
BdnfP21237 Rpl10-ps6-201ENSMUST00000121321 642 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm11266-201ENSMUST00000139835 1271 ntTSL 2 BASIC7.61□□□□□ -1.19
BdnfP21237 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC7.61□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms