Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm34397-201ENSMUST00000213192 708 ntTSL 3 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 AC122360.1-201ENSMUST00000217737 624 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 AC157570.2-201ENSMUST00000219091 700 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 AC123920.1-201ENSMUST00000221449 384 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 AC159293.1-201ENSMUST00000222662 545 ntTSL 3 BASIC6.29□□□□□ -1.4
Hmgb3O54879 CT009550.1-201ENSMUST00000225750 864 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC6.29□□□□□ -1.4
Hmgb3O54879 CT009556.2-201ENSMUST00000227980 1123 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Olfr978-201ENSMUST00000057161 936 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Olfr319-201ENSMUST00000076965 921 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm28497-201ENSMUST00000189646 3029 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm37080-201ENSMUST00000194804 2404 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 AC132467.1-201ENSMUST00000226498 1845 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Abca15-202ENSMUST00000121265 5335 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Abca15-201ENSMUST00000076272 5335 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm4858-203ENSMUST00000195847 1451 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hmgb3O54879 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 CT025548.2-201ENSMUST00000226227 1329 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm22426-201ENSMUST00000103811 96 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm13682-201ENSMUST00000117524 702 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Ccdc50-ps-201ENSMUST00000118044 941 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm24943-201ENSMUST00000158329 433 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm16580-201ENSMUST00000162696 1044 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm3147-201ENSMUST00000180178 1221 ntTSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm10424-201ENSMUST00000180232 1221 ntTSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Calm5-201ENSMUST00000183198 589 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm18118-201ENSMUST00000201064 645 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Kcne3-206ENSMUST00000207995 439 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Olfr471-201ENSMUST00000210091 936 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm19640-201ENSMUST00000214849 464 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm4257-201ENSMUST00000222877 513 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Mrps36-ps1-201ENSMUST00000061311 306 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm20302-201ENSMUST00000080671 275 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm5614-201ENSMUST00000091097 318 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Mir341-201ENSMUST00000093593 96 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm30655-201ENSMUST00000220498 1383 ntTSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Hmgb3O54879 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC6.28□□□□□ -1.4
Hmgb3O54879 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Hmgb3O54879 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
Hmgb3O54879 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms