Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm12851-201ENSMUST00000117920 421 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm13915-201ENSMUST00000119314 931 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm12727-201ENSMUST00000119885 359 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm12124-201ENSMUST00000120504 679 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm8084-201ENSMUST00000120807 752 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Ggact-204ENSMUST00000161322 524 ntTSL 2 BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm24576-201ENSMUST00000175508 248 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm37678-201ENSMUST00000192908 1146 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm42767-201ENSMUST00000198583 632 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm42760-201ENSMUST00000199814 311 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm34701-201ENSMUST00000204213 849 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm18619-201ENSMUST00000222722 1147 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm37956-201ENSMUST00000195208 2010 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Cyp2c29-201ENSMUST00000003137 1783 ntAPPRIS P2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm17083-201ENSMUST00000165849 1366 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Gm4863-201ENSMUST00000196907 1381 ntBASIC8.1□□□□□ -1.11
Chmp2aQ9DB34 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Adgrb3-201ENSMUST00000041838 5059 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Olfr1219-203ENSMUST00000214442 3694 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm12661-201ENSMUST00000118780 3335 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm12072-201ENSMUST00000118293 715 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm11954-201ENSMUST00000121403 349 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm14048-201ENSMUST00000121864 1268 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm371-201ENSMUST00000142240 1245 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Mllt3-208ENSMUST00000149357 794 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm24050-201ENSMUST00000158623 290 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Pid1-203ENSMUST00000175996 892 ntTSL 3 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm5327-201ENSMUST00000182864 1009 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Mir8110-201ENSMUST00000183771 97 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm17867-201ENSMUST00000188981 391 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm8896-201ENSMUST00000197434 1106 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm44245-201ENSMUST00000204304 232 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 AC162176.1-201ENSMUST00000216490 618 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm4898-201ENSMUST00000218519 832 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Olfr530-201ENSMUST00000074177 1080 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm44104-201ENSMUST00000204736 3777 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm43623-201ENSMUST00000199289 2663 ntBASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Ppfia2-203ENSMUST00000217854 8885 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Chmp2aQ9DB34 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.09□□□□□ -1.12
Chmp2aQ9DB34 Gm13571-201ENSMUST00000124654 1381 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Chmp2aQ9DB34 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.08□□□□□ -1.12
Chmp2aQ9DB34 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Chmp2aQ9DB34 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Chmp2aQ9DB34 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC8.08□□□□□ -1.12
Chmp2aQ9DB34 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Chmp2aQ9DB34 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Chmp2aQ9DB34 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms