Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gstp3-202ENSMUST00000189808 708 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm29168-201ENSMUST00000189953 687 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm37614-201ENSMUST00000195645 210 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm44213-201ENSMUST00000204977 703 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Cd37-208ENSMUST00000210372 960 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 AC153845.1-201ENSMUST00000213596 428 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 AC241621.1-201ENSMUST00000224499 430 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 AC154687.1-201ENSMUST00000224875 677 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 AC107663.2-201ENSMUST00000225534 1234 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 Olfr266-201ENSMUST00000059486 1027 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Il10ra-201ENSMUST00000034594 3498 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Bicc1-202ENSMUST00000131445 3005 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm31218-201ENSMUST00000221181 1498 ntTSL 5 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Npy2r-203ENSMUST00000182181 1331 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 AC126028.1-201ENSMUST00000226218 2123 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Slc25a5-ps-203ENSMUST00000223928 1442 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Rps19-ps2-201ENSMUST00000100614 438 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Mir1192-201ENSMUST00000116976 121 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm8688-201ENSMUST00000118240 969 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm6382-201ENSMUST00000118873 942 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm12034-201ENSMUST00000119032 399 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm13252-201ENSMUST00000119355 321 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm15062-201ENSMUST00000120567 367 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm14528-201ENSMUST00000120615 231 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm16188-201ENSMUST00000142019 420 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm25265-201ENSMUST00000158520 347 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm24050-201ENSMUST00000158623 290 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Rps19-ps1-201ENSMUST00000168472 438 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm2566-201ENSMUST00000201267 431 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm44902-201ENSMUST00000206177 805 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm44837-201ENSMUST00000206863 717 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Olfr1439-ps1-201ENSMUST00000207089 824 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm18944-201ENSMUST00000207672 643 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 AC155259.1-201ENSMUST00000214794 477 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm18631-201ENSMUST00000223125 1043 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm37534-201ENSMUST00000194483 5222 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Ugt3a2-201ENSMUST00000072403 2329 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm37262-201ENSMUST00000192816 1818 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Cyp17a1-201ENSMUST00000026012 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Gm42847-201ENSMUST00000201732 2553 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Clrn1Q8K445 AC133598.5-201ENSMUST00000224937 1517 ntBASIC7.47□□□□□ -1.21
Clrn1Q8K445 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Cbx3-204ENSMUST00000114446 1719 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
Clrn1Q8K445 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.21
Clrn1Q8K445 Gm43411-201ENSMUST00000196235 1579 ntBASIC7.46□□□□□ -1.21
Clrn1Q8K445 Gm43158-201ENSMUST00000198484 1555 ntBASIC7.46□□□□□ -1.21
Clrn1Q8K445 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC7.46□□□□□ -1.21
Clrn1Q8K445 Gm36952-201ENSMUST00000194923 3625 ntBASIC7.46□□□□□ -1.21
Clrn1Q8K445 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
Clrn1Q8K445 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 291.2 ms