Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm37506-201ENSMUST00000192008 143 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm6236-201ENSMUST00000193785 1009 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm37490-201ENSMUST00000195566 724 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm6394-201ENSMUST00000197077 477 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 AC158595.1-201ENSMUST00000217989 1435 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm19810-201ENSMUST00000218521 251 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 AC137117.3-201ENSMUST00000226265 485 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 AC154249.1-201ENSMUST00000226296 320 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Fabp5l2-201ENSMUST00000072582 408 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Ms4a10-201ENSMUST00000072748 1011 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm26264-201ENSMUST00000083278 159 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Oat-201ENSMUST00000084500 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Fgf2-202ENSMUST00000091203 535 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 AC132465.2-201ENSMUST00000218673 2728 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm5681-201ENSMUST00000189217 1533 ntBASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Gm12253-201ENSMUST00000108825 1356 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Ccdc87Q8CDL9 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 4930443O20Rik-201ENSMUST00000135659 1443 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm29113-201ENSMUST00000185991 3432 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Wfdc2-202ENSMUST00000109344 429 ntTSL 3 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm12106-201ENSMUST00000116006 1200 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm12883-201ENSMUST00000117867 364 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm13626-201ENSMUST00000119435 402 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm26436-201ENSMUST00000180325 132 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm28980-201ENSMUST00000187877 219 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm37270-201ENSMUST00000194277 330 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm17909-201ENSMUST00000207587 907 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm45900-201ENSMUST00000211879 409 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 AC153845.1-201ENSMUST00000213596 428 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 AC132468.1-201ENSMUST00000224706 499 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 AC131100.1-201ENSMUST00000226328 470 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 CT009556.2-201ENSMUST00000227980 1123 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm5619-201ENSMUST00000071172 760 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm10155-201ENSMUST00000084598 483 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Gm5841-201ENSMUST00000195307 2177 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Cyp2c53-ps-202ENSMUST00000175960 1370 ntBASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Ccdc87Q8CDL9 Cdh16-204ENSMUST00000211903 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms