Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Dock9-206ENSMUST00000212181 7368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Fam210a-201ENSMUST00000042852 9651 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Chrnb4-201ENSMUST00000034854 3723 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Smcr8-202ENSMUST00000102667 3544 ntBASIC10.92□□□□□ -0.66
Usp47Q8BY87 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Olfr212-201ENSMUST00000075756 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Pogk-203ENSMUST00000131487 8692 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Gm7134-201ENSMUST00000122296 2406 ntBASIC10.92□□□□□ -0.66
Usp47Q8BY87 Cyhr1-202ENSMUST00000081291 3959 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC10.91□□□□□ -0.66
Usp47Q8BY87 Fxyd5-207ENSMUST00000161684 1172 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC10.91□□□□□ -0.66
Usp47Q8BY87 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Gm28894-201ENSMUST00000185214 615 ntBASIC10.91□□□□□ -0.66
Usp47Q8BY87 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Gm37369-201ENSMUST00000194179 615 ntBASIC10.91□□□□□ -0.66
Usp47Q8BY87 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Gm9118-201ENSMUST00000219246 754 ntBASIC10.91□□□□□ -0.66
Usp47Q8BY87 Gm36719-201ENSMUST00000219518 927 ntTSL 5 BASIC10.91□□□□□ -0.66
Usp47Q8BY87 AC161537.1-202ENSMUST00000228450 868 ntBASIC10.91□□□□□ -0.66
Usp47Q8BY87 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC10.91□□□□□ -0.66
Usp47Q8BY87 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Nfkbiz-203ENSMUST00000114457 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Abhd2-201ENSMUST00000037315 6877 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 4831440D22Rik-201ENSMUST00000211287 2929 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Usp47Q8BY87 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC10.91□□□□□ -0.66
Usp47Q8BY87 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Usp47Q8BY87 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm8624-201ENSMUST00000118083 432 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm14480-201ENSMUST00000118521 433 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm5759-201ENSMUST00000119203 811 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm10157-201ENSMUST00000139408 343 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC10.9□□□□□ -0.66
Usp47Q8BY87 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm28087-201ENSMUST00000189195 767 ntTSL 5 BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm29435-201ENSMUST00000191310 689 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm37225-201ENSMUST00000193423 325 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm4605-201ENSMUST00000203148 625 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 AC160338.3-201ENSMUST00000214836 384 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC10.9□□□□□ -0.66
Usp47Q8BY87 AC154838.3-201ENSMUST00000228876 965 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm20900-201ENSMUST00000078729 472 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Gm28649-201ENSMUST00000189153 1581 ntBASIC10.9□□□□□ -0.66
Usp47Q8BY87 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Usp47Q8BY87 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm13622-201ENSMUST00000120658 433 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm22206-201ENSMUST00000158612 116 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm17047-201ENSMUST00000167709 430 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm24923-201ENSMUST00000178201 88 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm18254-201ENSMUST00000185699 1204 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm3121-201ENSMUST00000187086 406 ntBASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC10.9□□□□□ -0.67
Usp47Q8BY87 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC10.9□□□□□ -0.67
Usp47Q8BY87 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC10.9□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms