Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 AC124675.1-201ENSMUST00000226263 1390 ntBASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm9493-201ENSMUST00000104916 579 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Cfap100-205ENSMUST00000135757 289 ntTSL 5 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm26182-201ENSMUST00000157688 116 ntBASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm26812-201ENSMUST00000181647 328 ntTSL 3 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm5575-201ENSMUST00000190879 398 ntBASIC9.29□□□□□ -0.92
Vps54Q5SPW0 4933403L11Rik-201ENSMUST00000193857 1121 ntBASIC9.29□□□□□ -0.92
Vps54Q5SPW0 AC152922.1-201ENSMUST00000216518 1232 ntBASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm40853-201ENSMUST00000221342 582 ntBASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm9255-201ENSMUST00000223225 581 ntBASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm10123-201ENSMUST00000075723 490 ntBASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm17199-201ENSMUST00000097296 416 ntBASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Zfp831-201ENSMUST00000059452 9807 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Rab39b-201ENSMUST00000033545 3401 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm44228-201ENSMUST00000204888 2026 ntBASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 CT009515.4-201ENSMUST00000228165 1494 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm15114-201ENSMUST00000112788 1974 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Klhl41-201ENSMUST00000100050 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm14509-201ENSMUST00000117312 1286 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm11558-201ENSMUST00000118454 459 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm5390-201ENSMUST00000119069 1230 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 n-R5s47-201ENSMUST00000122516 119 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm22408-201ENSMUST00000174925 65 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm27595-201ENSMUST00000184579 112 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm29355-201ENSMUST00000188178 697 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm28953-201ENSMUST00000188336 697 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm20788-201ENSMUST00000190538 697 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm37977-201ENSMUST00000193096 721 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm37395-201ENSMUST00000194721 697 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm6885-201ENSMUST00000217261 372 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 AC154785.1-201ENSMUST00000223280 572 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 AC154806.1-202ENSMUST00000227949 885 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Mir135b-201ENSMUST00000083501 97 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm42972-201ENSMUST00000196937 5617 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 AC166341.5-201ENSMUST00000222206 1400 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm43571-201ENSMUST00000200067 3098 ntBASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC9.28□□□□□ -0.92
Vps54Q5SPW0 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC9.27□□□□□ -0.92
Vps54Q5SPW0 Casq2-201ENSMUST00000029454 2556 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Vps54Q5SPW0 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Vps54Q5SPW0 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Vps54Q5SPW0 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Vps54Q5SPW0 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Vps54Q5SPW0 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.92
Vps54Q5SPW0 Prrg1-202ENSMUST00000114025 3964 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Vps54Q5SPW0 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Vps54Q5SPW0 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC9.27□□□□□ -0.93
Vps54Q5SPW0 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Vps54Q5SPW0 4930562C15Rik-201ENSMUST00000100211 3829 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Vps54Q5SPW0 Gm12219-201ENSMUST00000119198 443 ntBASIC9.27□□□□□ -0.93
Vps54Q5SPW0 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vps54Q5SPW0 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Vps54Q5SPW0 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC9.27□□□□□ -0.93
Vps54Q5SPW0 Gm4835-201ENSMUST00000155839 972 ntBASIC9.27□□□□□ -0.93
Vps54Q5SPW0 Gm22687-201ENSMUST00000158301 105 ntBASIC9.27□□□□□ -0.93
Vps54Q5SPW0 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms