Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Fer-201ENSMUST00000000129 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Med23-201ENSMUST00000020159 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Ripor2-203ENSMUST00000091694 3142 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm26790-201ENSMUST00000181078 2291 ntTSL 5 BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 4933406G16Rik-201ENSMUST00000144854 1415 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Smpd4-209ENSMUST00000165363 3046 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 AC140393.1-202ENSMUST00000228347 1818 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm23323-201ENSMUST00000104471 133 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm14925-201ENSMUST00000120611 438 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm16212-201ENSMUST00000136190 282 ntTSL 5 BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 4930426I24Rik-201ENSMUST00000180709 601 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Ppp1r2-ps7-202ENSMUST00000185057 763 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm28164-201ENSMUST00000190143 442 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm44856-201ENSMUST00000206639 304 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm7546-202ENSMUST00000211354 275 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 AC155941.3-201ENSMUST00000218476 308 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 AC115304.1-202ENSMUST00000226850 837 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm7389-201ENSMUST00000181162 2884 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Lrrc18-201ENSMUST00000038956 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm16121-201ENSMUST00000128520 2253 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Kdm4a-201ENSMUST00000050288 3279 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 AC107452.3-201ENSMUST00000228807 1308 ntBASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Cdh18-203ENSMUST00000164787 2744 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Grip1-207ENSMUST00000130387 2780 ntTSL 5 BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Sf3b2Q3UJB0 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Mrpl19-201ENSMUST00000032124 5000 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm43776-201ENSMUST00000199729 2914 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Cep112-202ENSMUST00000106715 1161 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm4342-201ENSMUST00000118982 367 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Hspe1-ps4-201ENSMUST00000119538 286 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm5843-201ENSMUST00000121631 476 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm25782-201ENSMUST00000122526 289 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm12504-202ENSMUST00000148026 306 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm43542-201ENSMUST00000199505 379 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm3549-201ENSMUST00000203873 794 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm46317-201ENSMUST00000221103 393 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Olfr1448-201ENSMUST00000054737 945 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm38012-201ENSMUST00000193022 3029 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Fgd3-201ENSMUST00000048716 3519 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Arhgap24-201ENSMUST00000070000 3632 ntTSL 5 BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm19801-201ENSMUST00000218231 1882 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm42435-201ENSMUST00000196630 1448 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm3203-201ENSMUST00000197670 2389 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm13108-201ENSMUST00000122287 1455 ntBASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Asns-201ENSMUST00000031766 2001 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Tnfrsf19-201ENSMUST00000111234 4051 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Sf3b2Q3UJB0 Gm42692-201ENSMUST00000199482 2833 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Mark3-206ENSMUST00000221459 2807 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Cntn1-204ENSMUST00000169825 5671 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Adal-202ENSMUST00000066155 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Pln-202ENSMUST00000163319 1715 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Cenpi-202ENSMUST00000101251 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm43376-201ENSMUST00000198939 1887 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Tor1aip2-202ENSMUST00000065648 2529 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms