Protein–RNA interactions for Protein: Q07409

Cntn3, Contactin-3, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn3Q07409 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm5883-201ENSMUST00000120735 495 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm5270-201ENSMUST00000121506 1002 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm22636-201ENSMUST00000158142 275 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm6123-201ENSMUST00000193658 1069 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm7443-201ENSMUST00000206355 378 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Nbdy-206ENSMUST00000208373 1061 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm3774-201ENSMUST00000209773 435 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm45255-201ENSMUST00000209943 811 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm9689-201ENSMUST00000210009 428 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm46191-201ENSMUST00000218899 433 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Serpinb6d-202ENSMUST00000221681 1256 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 AC163295.2-202ENSMUST00000227763 1053 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 AC171241.2-201ENSMUST00000228744 892 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Olfr1153-201ENSMUST00000052300 957 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Mycbpap-202ENSMUST00000093945 3168 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Mmp19-201ENSMUST00000026411 3402 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Olfr943-205ENSMUST00000215770 8308 ntAPPRIS ALT2 TSL 2 BASIC8.59□□□□□ -1.03
Cntn3Q07409 Luzp2-201ENSMUST00000082373 4901 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Gm5316-202ENSMUST00000185734 3096 ntBASIC8.59□□□□□ -1.03
Cntn3Q07409 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Cntn3Q07409 Mapk14-203ENSMUST00000114752 3148 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Tmcc1-209ENSMUST00000173548 1622 ntAPPRIS ALT2 TSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm12378-201ENSMUST00000116171 1461 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 AC125074.1-201ENSMUST00000227970 1331 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Ccdc114-203ENSMUST00000210602 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Arhgap21-210ENSMUST00000154230 6972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Dalir-201ENSMUST00000188773 2170 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm43420-201ENSMUST00000198012 1857 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 AC160637.1-201ENSMUST00000214037 3887 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 AC122887.1-201ENSMUST00000219265 2722 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm22271-201ENSMUST00000104035 128 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm11933-201ENSMUST00000121550 375 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm1322-201ENSMUST00000134620 704 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm9399-201ENSMUST00000175771 639 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm25947-201ENSMUST00000180343 110 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm27034-201ENSMUST00000182552 940 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Mir6940-201ENSMUST00000183447 70 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm18301-201ENSMUST00000185261 888 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm28351-201ENSMUST00000186261 559 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm28493-201ENSMUST00000188427 604 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm29664-201ENSMUST00000191125 463 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm17970-201ENSMUST00000192199 685 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm36966-201ENSMUST00000192217 413 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm37185-201ENSMUST00000193852 410 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm4873-201ENSMUST00000199402 1203 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm18914-201ENSMUST00000214625 616 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm8767-201ENSMUST00000215786 1070 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm34809-201ENSMUST00000220510 1135 ntTSL 5 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC8.58□□□□□ -1.04
Cntn3Q07409 Gm8616-201ENSMUST00000222175 1037 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 AC192333.4-201ENSMUST00000224269 981 ntBASIC8.58□□□□□ -1.04
Cntn3Q07409 Tmem216-201ENSMUST00000025569 1101 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Prap1-201ENSMUST00000026540 620 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Cntn3Q07409 Olfr1484-201ENSMUST00000074180 948 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms