Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Ighv10-2-201ENSMUST00000195182 298 ntBASIC8.73□□□□□ -1.01
Rrp1P56183 Gm44451-201ENSMUST00000203767 483 ntBASIC8.73□□□□□ -1.01
Rrp1P56183 Gm6312-201ENSMUST00000204060 1194 ntBASIC8.73□□□□□ -1.01
Rrp1P56183 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC8.73□□□□□ -1.01
Rrp1P56183 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC8.73□□□□□ -1.01
Rrp1P56183 Gm18024-201ENSMUST00000218516 690 ntBASIC8.73□□□□□ -1.01
Rrp1P56183 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rrp1P56183 Ermard-209ENSMUST00000226561 1019 ntBASIC8.73□□□□□ -1.01
Rrp1P56183 AC147096.1-201ENSMUST00000227648 352 ntBASIC8.73□□□□□ -1.01
Rrp1P56183 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rrp1P56183 Gm5590-201ENSMUST00000059110 345 ntBASIC8.73□□□□□ -1.01
Rrp1P56183 Mir486-201ENSMUST00000093576 128 ntBASIC8.73□□□□□ -1.01
Rrp1P56183 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC8.73□□□□□ -1.01
Rrp1P56183 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.73□□□□□ -1.01
Rrp1P56183 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rrp1P56183 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rrp1P56183 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rrp1P56183 Sgo1-201ENSMUST00000024736 3628 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rrp1P56183 Slirp-204ENSMUST00000161023 2701 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rrp1P56183 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rrp1P56183 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.73□□□□□ -1.01
Rrp1P56183 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Rrp1P56183 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rrp1P56183 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rrp1P56183 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rrp1P56183 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rrp1P56183 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rrp1P56183 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rrp1P56183 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC8.72□□□□□ -1.01
Rrp1P56183 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rrp1P56183 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Senp1-201ENSMUST00000044189 6575 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Gm23131-201ENSMUST00000104253 132 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Gm15355-201ENSMUST00000118929 285 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 Gm14824-201ENSMUST00000119421 737 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 Gm14450-201ENSMUST00000119984 240 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 Gm8865-201ENSMUST00000125697 430 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Gm23663-201ENSMUST00000158045 80 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.72□□□□□ -1.01
Rrp1P56183 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC8.72□□□□□ -1.01
Rrp1P56183 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC8.72□□□□□ -1.01
Rrp1P56183 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC8.72□□□□□ -1.01
Rrp1P56183 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rrp1P56183 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC8.72□□□□□ -1.01
Rrp1P56183 AC139323.1-201ENSMUST00000223370 1040 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 AC154687.1-201ENSMUST00000224875 677 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 AC123867.1-201ENSMUST00000224990 816 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
Rrp1P56183 Gm43339-201ENSMUST00000200032 1606 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 Grik1-210ENSMUST00000228034 2708 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Map1b-201ENSMUST00000064762 11808 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rrp1P56183 Npr3-204ENSMUST00000228489 1969 ntBASIC8.72□□□□□ -1.01
Rrp1P56183 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Rrp1P56183 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rrp1P56183 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rrp1P56183 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rrp1P56183 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
Rrp1P56183 Nrk-202ENSMUST00000113052 8043 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Rrp1P56183 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rrp1P56183 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rrp1P56183 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Rrp1P56183 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Rrp1P56183 Gm12883-201ENSMUST00000117867 364 ntBASIC8.71□□□□□ -1.02
Rrp1P56183 Gm9164-201ENSMUST00000118700 1014 ntBASIC8.71□□□□□ -1.02
Rrp1P56183 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rrp1P56183 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.71□□□□□ -1.02
Rrp1P56183 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC8.71□□□□□ -1.02
Rrp1P56183 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC8.71□□□□□ -1.02
Rrp1P56183 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Rrp1P56183 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rrp1P56183 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.71□□□□□ -1.02
Rrp1P56183 Mir6930-201ENSMUST00000183859 68 ntBASIC8.71□□□□□ -1.02
Rrp1P56183 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Rrp1P56183 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Rrp1P56183 Gm6236-201ENSMUST00000193785 1009 ntBASIC8.71□□□□□ -1.02
Rrp1P56183 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.71□□□□□ -1.02
Rrp1P56183 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Rrp1P56183 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.71□□□□□ -1.02
Rrp1P56183 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms