Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cux1P53564 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cux1P53564 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC11.81□□□□□ -0.52
Cux1P53564 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cux1P53564 Gpatch2-202ENSMUST00000065573 4547 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cux1P53564 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC11.81□□□□□ -0.52
Cux1P53564 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Cux1P53564 4930407I10Rik-201ENSMUST00000100396 4673 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cux1P53564 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cux1P53564 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cux1P53564 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.81□□□□□ -0.52
Cux1P53564 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cux1P53564 Gm44289-201ENSMUST00000204144 1390 ntBASIC11.81□□□□□ -0.52
Cux1P53564 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
Cux1P53564 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cux1P53564 AC126251.1-201ENSMUST00000228170 2707 ntBASIC11.81□□□□□ -0.52
Cux1P53564 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cux1P53564 Gm23657-201ENSMUST00000122623 294 ntBASIC11.81□□□□□ -0.52
Cux1P53564 Gm16102-201ENSMUST00000160955 420 ntBASIC11.81□□□□□ -0.52
Cux1P53564 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC11.81□□□□□ -0.52
Cux1P53564 Gm27178-201ENSMUST00000184962 340 ntBASIC11.81□□□□□ -0.52
Cux1P53564 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC11.81□□□□□ -0.52
Cux1P53564 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC11.81□□□□□ -0.52
Cux1P53564 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC11.81□□□□□ -0.52
Cux1P53564 Gm18631-201ENSMUST00000223125 1043 ntBASIC11.81□□□□□ -0.52
Cux1P53564 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Zbtb37-206ENSMUST00000172044 3883 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Il31ra-206ENSMUST00000224510 2946 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cux1P53564 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Cux1P53564 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cux1P53564 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 BC085271-201ENSMUST00000191852 1487 ntBASIC11.8□□□□□ -0.52
Cux1P53564 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 5730455P16Rik-201ENSMUST00000103225 4554 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Gm43980-201ENSMUST00000204899 1612 ntBASIC11.8□□□□□ -0.52
Cux1P53564 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Gm42678-201ENSMUST00000197163 2221 ntBASIC11.8□□□□□ -0.52
Cux1P53564 Srbd1-201ENSMUST00000095187 3530 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cux1P53564 Hrh1-205ENSMUST00000161650 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Zfp704-201ENSMUST00000041124 13834 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cux1P53564 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC11.8□□□□□ -0.52
Cux1P53564 Gm13130-201ENSMUST00000119195 1166 ntBASIC11.8□□□□□ -0.52
Cux1P53564 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC11.8□□□□□ -0.52
Cux1P53564 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Gm22533-201ENSMUST00000158821 274 ntBASIC11.8□□□□□ -0.52
Cux1P53564 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cux1P53564 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cux1P53564 Gm8206-203ENSMUST00000171428 997 ntTSL 5 BASIC11.8□□□□□ -0.52
Cux1P53564 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Gm3611-201ENSMUST00000173687 877 ntBASIC11.8□□□□□ -0.52
Cux1P53564 Gm3500-202ENSMUST00000178058 609 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 n-R5s93-201ENSMUST00000180091 119 ntBASIC11.8□□□□□ -0.52
Cux1P53564 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Gm29143-201ENSMUST00000189462 201 ntBASIC11.8□□□□□ -0.52
Cux1P53564 Gm4870-201ENSMUST00000198525 1251 ntBASIC11.8□□□□□ -0.52
Cux1P53564 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC11.8□□□□□ -0.52
Cux1P53564 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cux1P53564 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC11.8□□□□□ -0.52
Cux1P53564 Ctnnd1-206ENSMUST00000111675 5089 ntTSL 5 BASIC11.8□□□□□ -0.52
Cux1P53564 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Cux1P53564 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Cux1P53564 9330104G04Rik-201ENSMUST00000181501 2242 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cux1P53564 Ccr6-201ENSMUST00000097418 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 4930517E11Rik-201ENSMUST00000129584 1457 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cux1P53564 Gm10388-201ENSMUST00000205001 2936 ntBASIC11.79□□□□□ -0.52
Cux1P53564 Synpo2-202ENSMUST00000106426 7063 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 Papola-215ENSMUST00000170002 2605 ntTSL 5 BASIC11.79□□□□□ -0.52
Cux1P53564 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 Nlgn3-206ENSMUST00000151528 8541 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cux1P53564 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC11.79□□□□□ -0.52
Cux1P53564 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Cux1P53564 Gm15484-201ENSMUST00000118871 828 ntBASIC11.79□□□□□ -0.52
Cux1P53564 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC11.79□□□□□ -0.52
Cux1P53564 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC11.79□□□□□ -0.52
Cux1P53564 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 Gm29129-201ENSMUST00000191121 659 ntTSL 3 BASIC11.79□□□□□ -0.52
Cux1P53564 Gm38177-201ENSMUST00000192213 1040 ntBASIC11.79□□□□□ -0.52
Cux1P53564 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 Gm18655-201ENSMUST00000214802 1090 ntBASIC11.79□□□□□ -0.52
Cux1P53564 AC127224.1-201ENSMUST00000218094 453 ntBASIC11.79□□□□□ -0.52
Cux1P53564 Kif3c-204ENSMUST00000219895 2962 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cux1P53564 AC123920.1-201ENSMUST00000221449 384 ntBASIC11.79□□□□□ -0.52
Cux1P53564 AC155270.1-202ENSMUST00000221503 352 ntBASIC11.79□□□□□ -0.52
Cux1P53564 AC160114.2-201ENSMUST00000223021 300 ntBASIC11.79□□□□□ -0.52
Cux1P53564 CT025630.2-201ENSMUST00000228293 487 ntBASIC11.79□□□□□ -0.52
Cux1P53564 Olfr159-201ENSMUST00000053931 960 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cux1P53564 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms