Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 4930543I11Rik-201ENSMUST00000219006 959 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Gm4808-201ENSMUST00000222283 1203 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 CT009550.2-201ENSMUST00000228851 399 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 AC154757.2-201ENSMUST00000228885 743 ntBASIC10.13□□□□□ -0.79
Col18a1P39061 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Col18a1P39061 A430105I19Rik-201ENSMUST00000059997 4703 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
Col18a1P39061 Vma21-202ENSMUST00000114576 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Col18a1P39061 Ttll1-203ENSMUST00000109480 1876 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Col18a1P39061 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
Col18a1P39061 Itgal-203ENSMUST00000118405 3909 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 5430427N15Rik-201ENSMUST00000200007 2393 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Col18a1P39061 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Gm22256-201ENSMUST00000102291 107 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Gm14716-201ENSMUST00000120138 718 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Gm25117-201ENSMUST00000157194 144 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Gm24011-201ENSMUST00000157732 268 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Gm7867-201ENSMUST00000189856 546 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Gm29141-201ENSMUST00000190357 882 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Gm17965-201ENSMUST00000193904 517 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Ighv8-3-201ENSMUST00000194985 295 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC10.12□□□□□ -0.79
Col18a1P39061 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Gm45626-201ENSMUST00000210093 361 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 AC192091.1-201ENSMUST00000218668 439 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Vmn1r34-201ENSMUST00000074381 930 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
Col18a1P39061 2700062C07Rik-201ENSMUST00000097646 1040 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC10.12□□□□□ -0.79
Col18a1P39061 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC10.12□□□□□ -0.79
Col18a1P39061 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Col18a1P39061 Gpat4-201ENSMUST00000167004 5518 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Ece2-207ENSMUST00000079600 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Gm43589-201ENSMUST00000199400 1523 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Col18a1P39061 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC10.12□□□□□ -0.79
Col18a1P39061 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Creb5-202ENSMUST00000203487 2648 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Col18a1P39061 Gramd4-201ENSMUST00000088931 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Gm4849-201ENSMUST00000188428 2246 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Olfr806-202ENSMUST00000213239 3724 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Col18a1P39061 Fam124b-201ENSMUST00000058748 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 CT009757.4-201ENSMUST00000221520 2541 ntBASIC10.12□□□□□ -0.79
Col18a1P39061 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC10.12□□□□□ -0.79
Col18a1P39061 Spry4-201ENSMUST00000025295 4587 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Col18a1P39061 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC10.11□□□□□ -0.79
Col18a1P39061 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm4919-201ENSMUST00000117825 604 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 Gm23450-201ENSMUST00000178285 91 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 Gm27034-201ENSMUST00000182552 940 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 Gm43495-201ENSMUST00000200060 205 ntTSL 5 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm38574-201ENSMUST00000211855 640 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 1810014B01Rik-205ENSMUST00000218691 323 ntTSL 3 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm35638-201ENSMUST00000220724 652 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 AC122533.1-201ENSMUST00000225177 767 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Adamts9-205ENSMUST00000167391 6033 ntTSL 5 BASIC10.11□□□□□ -0.79
Col18a1P39061 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.11□□□□□ -0.79
Col18a1P39061 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm42656-201ENSMUST00000201506 2305 ntBASIC10.11□□□□□ -0.79
Col18a1P39061 Dbndd2-203ENSMUST00000109349 3597 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Hmgcll1-205ENSMUST00000183425 3239 ntTSL 5 BASIC10.11□□□□□ -0.79
Col18a1P39061 Ube4bos1-201ENSMUST00000141259 2227 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 4921511C10Rik-201ENSMUST00000200412 1463 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Pitrm1-207ENSMUST00000222485 3906 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC10.11□□□□□ -0.79
Col18a1P39061 AA986860-201ENSMUST00000039323 2909 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Vps8-204ENSMUST00000117598 4935 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Col18a1P39061 Gm20730-201ENSMUST00000103301 359 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Col18a1P39061 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC10.11□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 267.3 ms