Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC8.32□□□□□ -1.08
Usp4P35123 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC8.32□□□□□ -1.08
Usp4P35123 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC8.32□□□□□ -1.08
Usp4P35123 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC8.32□□□□□ -1.08
Usp4P35123 CT030646.1-201ENSMUST00000225049 980 ntBASIC8.32□□□□□ -1.08
Usp4P35123 AC160930.2-201ENSMUST00000226608 303 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Olfr155-201ENSMUST00000095108 1172 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
Usp4P35123 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Usp4P35123 Olfr1198-202ENSMUST00000215179 3145 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Olfr180-203ENSMUST00000206168 1518 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 AC164433.1-201ENSMUST00000226138 1544 ntBASIC8.32□□□□□ -1.08
Usp4P35123 Dctn5-201ENSMUST00000033156 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC8.32□□□□□ -1.08
Usp4P35123 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC8.32□□□□□ -1.08
Usp4P35123 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Usp4P35123 1110008L16Rik-202ENSMUST00000183475 2204 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 AC126251.1-201ENSMUST00000228170 2707 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gm38368-201ENSMUST00000193181 1335 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Plxna2-201ENSMUST00000027952 11040 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 Gm15209-201ENSMUST00000117703 400 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Gm15572-201ENSMUST00000119248 593 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Olfr621-ps1-201ENSMUST00000119741 938 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp4P35123 Gm12583-201ENSMUST00000120677 853 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Gm12120-201ENSMUST00000125068 592 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp4P35123 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC8.31□□□□□ -1.08
Usp4P35123 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gm16031-201ENSMUST00000153253 448 ntTSL 2 BASIC8.31□□□□□ -1.08
Usp4P35123 Gm26040-201ENSMUST00000158147 161 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Gm15756-201ENSMUST00000161447 670 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gm25442-201ENSMUST00000177270 92 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC8.31□□□□□ -1.08
Usp4P35123 Gm5981-201ENSMUST00000199912 487 ntBASIC8.31□□□□□ -1.08
Usp4P35123 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 Gm19885-201ENSMUST00000212853 343 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 CT009546.3-201ENSMUST00000220914 208 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp4P35123 Gm22830-201ENSMUST00000083772 130 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Olfr1198-203ENSMUST00000215529 3413 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Usp4P35123 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Gm37940-201ENSMUST00000194243 3251 ntBASIC8.31□□□□□ -1.08
Usp4P35123 Tpd52l2-208ENSMUST00000149163 3603 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Ect2-207ENSMUST00000176242 3985 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC8.31□□□□□ -1.08
Usp4P35123 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Usp4P35123 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Usp4P35123 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Usp4P35123 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp4P35123 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp4P35123 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp4P35123 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp4P35123 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp4P35123 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp4P35123 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp4P35123 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp4P35123 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Usp4P35123 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC8.3□□□□□ -1.08
Usp4P35123 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Usp4P35123 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.3□□□□□ -1.08
Usp4P35123 Gm22426-201ENSMUST00000103811 96 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms