Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Pole-201ENSMUST00000007296 7163 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Il5ra-203ENSMUST00000205004 2271 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC6.23□□□□□ -1.41
Sdc1P18828 Gm6350-201ENSMUST00000195099 1339 ntBASIC6.23□□□□□ -1.41
Sdc1P18828 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Dppa1-201ENSMUST00000077173 1575 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Sdc1P18828 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm43872-201ENSMUST00000203218 2213 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Vmn1r218-204ENSMUST00000227160 9558 ntAPPRIS ALT2 BASIC6.22□□□□□ -1.41
Sdc1P18828 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 5430421F17Rik-202ENSMUST00000210268 2295 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Csmd1-201ENSMUST00000082104 14182 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm37886-201ENSMUST00000195349 1513 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Gm44116-201ENSMUST00000204269 1525 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Mir501-201ENSMUST00000102296 109 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
Sdc1P18828 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sdc1P18828 Dtwd1-201ENSMUST00000110437 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 1700013D24Rik-201ENSMUST00000112537 535 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm6382-201ENSMUST00000118873 942 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm17207-201ENSMUST00000168686 645 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Vmn2r-ps41-201ENSMUST00000173587 980 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Gm3159-203ENSMUST00000177764 618 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Calm5-201ENSMUST00000183198 589 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Gm7627-201ENSMUST00000183205 999 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Gm3745-201ENSMUST00000193773 421 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Crip1-205ENSMUST00000199089 509 ntTSL 3 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm18988-201ENSMUST00000205601 746 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm6331-201ENSMUST00000217890 450 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 AC146596.1-201ENSMUST00000223507 223 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sdc1P18828 Scp2-ps2-201ENSMUST00000072166 478 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Vmn1r219-201ENSMUST00000076180 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm5614-201ENSMUST00000091097 318 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Hba-a1-201ENSMUST00000093209 699 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 AC122356.1-202ENSMUST00000227328 2758 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.22□□□□□ -1.41
Sdc1P18828 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Sdc1P18828 Gm20731-201ENSMUST00000193462 2288 ntBASIC6.22□□□□□ -1.41
Sdc1P18828 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
Sdc1P18828 AC120347.2-201ENSMUST00000222224 2015 ntBASIC6.21□□□□□ -1.41
Sdc1P18828 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
Sdc1P18828 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Sdc1P18828 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.21□□□□□ -1.41
Sdc1P18828 Gm44834-201ENSMUST00000206671 1396 ntBASIC6.21□□□□□ -1.41
Sdc1P18828 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.21□□□□□ -1.41
Sdc1P18828 Gm42763-201ENSMUST00000199595 2087 ntBASIC6.21□□□□□ -1.41
Sdc1P18828 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Cdk5rap2-206ENSMUST00000144099 11847 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Gm24279-201ENSMUST00000104236 131 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Sdc1P18828 Gm12838-201ENSMUST00000116278 325 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Uqcc2-202ENSMUST00000118613 426 ntTSL 3 BASIC6.21□□□□□ -1.42
Sdc1P18828 Gm15047-201ENSMUST00000118891 454 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Gm8172-201ENSMUST00000120762 750 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Gm14407-201ENSMUST00000121260 447 ntBASIC6.21□□□□□ -1.42
Sdc1P18828 Gm13360-201ENSMUST00000121607 799 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms