Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm30708-201ENSMUST00000202183 312 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm29815-201ENSMUST00000202418 178 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm7384-201ENSMUST00000203682 530 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Ceacam10-203ENSMUST00000206847 662 ntTSL 2 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm44969-201ENSMUST00000207829 549 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm18645-201ENSMUST00000209593 651 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm18907-201ENSMUST00000209719 932 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Olfr956-ps1-201ENSMUST00000216492 867 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm18623-201ENSMUST00000219860 953 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 AC101709.1-201ENSMUST00000220276 909 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 AC163684.1-201ENSMUST00000223766 927 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 AC113031.6-202ENSMUST00000228468 1145 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Olfr1329-201ENSMUST00000071979 942 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Olfr1507-201ENSMUST00000073571 1112 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Olfr640-201ENSMUST00000084799 945 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm16123-201ENSMUST00000118647 1517 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 AC122357.2-201ENSMUST00000220732 1525 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Serpinb6a-202ENSMUST00000043552 1547 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Map4k4-215ENSMUST00000195259 3719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Clec1a-201ENSMUST00000037481 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Atxn7l1-210ENSMUST00000144586 3042 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm43219-201ENSMUST00000197972 1937 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Kcnma1-210ENSMUST00000179836 3177 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Stat1-212ENSMUST00000191435 2803 ntAPPRIS ALT1 TSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 AC122402.1-201ENSMUST00000225199 2303 ntBASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Cinp-202ENSMUST00000220607 1579 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Uroc1-202ENSMUST00000164761 3462 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Trim39Q9ESN2 4933427E13Rik-202ENSMUST00000125234 1493 ntTSL 2 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm37398-201ENSMUST00000191914 1466 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim39Q9ESN2 Fgr-204ENSMUST00000171223 2398 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm10472-201ENSMUST00000193014 2102 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 A830036E02Rik-204ENSMUST00000139095 3413 ntTSL 2 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Fam227b-201ENSMUST00000110446 1858 ntAPPRIS P2 TSL 5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Olfr994-202ENSMUST00000214679 1648 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Patj-207ENSMUST00000107034 4799 ntTSL 5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm44998-201ENSMUST00000207091 1768 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm9430-201ENSMUST00000121232 1527 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Ccdc83-201ENSMUST00000040413 1546 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Trim39Q9ESN2 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim39Q9ESN2 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim39Q9ESN2 Arl6-201ENSMUST00000023405 1696 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim39Q9ESN2 Igkv3-4-201ENSMUST00000103401 360 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm12774-201ENSMUST00000117881 416 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm9392-201ENSMUST00000119337 554 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm14945-201ENSMUST00000119556 1118 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm11990-201ENSMUST00000121505 897 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm25319-201ENSMUST00000122552 325 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm24685-201ENSMUST00000157764 285 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm10012-202ENSMUST00000170379 372 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Ly6g6e-202ENSMUST00000172494 464 ntTSL 3 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm22871-201ENSMUST00000177097 54 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm379-201ENSMUST00000178160 888 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm12728-202ENSMUST00000184254 234 ntAPPRIS P5 TSL 5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm12728-203ENSMUST00000185012 234 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm29423-205ENSMUST00000189006 1138 ntAPPRIS P5 TSL 5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm29485-201ENSMUST00000190220 282 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm18865-201ENSMUST00000193011 1171 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm2474-201ENSMUST00000195162 559 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm18150-201ENSMUST00000195341 645 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm43446-201ENSMUST00000197669 1096 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm42952-204ENSMUST00000198572 408 ntTSL 3 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm36070-202ENSMUST00000200467 961 ntTSL 1 (best) BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm29725-201ENSMUST00000206614 407 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm6063-201ENSMUST00000206958 485 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC8□□□□□ -1.13
Trim39Q9ESN2 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC8□□□□□ -1.13
Trim39Q9ESN2 AC158603.2-201ENSMUST00000219191 315 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 AC112157.1-201ENSMUST00000226016 543 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Lgals9-201ENSMUST00000073001 1074 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm7027-201ENSMUST00000086958 862 ntBASIC8□□□□□ -1.13
Trim39Q9ESN2 Olfr1132-201ENSMUST00000090711 927 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Olfr1057-201ENSMUST00000099892 948 ntAPPRIS P1 BASIC8□□□□□ -1.13
Trim39Q9ESN2 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms