Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Gm18313-201ENSMUST00000221036 1784 ntBASIC7.71□□□□□ -1.18
Sf3a3Q9D554 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.71□□□□□ -1.18
Sf3a3Q9D554 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Sf3a3Q9D554 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Sf3a3Q9D554 Gm37258-201ENSMUST00000191734 1627 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm1141-201ENSMUST00000101495 2147 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Ift80-202ENSMUST00000107812 4063 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 AC135119.1-202ENSMUST00000228435 2203 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm24665-201ENSMUST00000104160 129 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm13726-201ENSMUST00000121278 794 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Mettl8-205ENSMUST00000121586 1151 ntTSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm13546-201ENSMUST00000135735 401 ntTSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm15627-201ENSMUST00000140421 437 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm17171-201ENSMUST00000168048 534 ntTSL 3 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm8257-203ENSMUST00000179215 489 ntTSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm933-201ENSMUST00000179384 679 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Calm5-201ENSMUST00000183198 589 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm9553-201ENSMUST00000185703 996 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 1700009C05Rik-201ENSMUST00000191101 788 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm29068-201ENSMUST00000191607 400 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Olfr1398-ps1-201ENSMUST00000193866 929 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm43235-201ENSMUST00000200121 297 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm6308-201ENSMUST00000203226 313 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Gm18485-201ENSMUST00000203788 1114 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 AC122360.1-201ENSMUST00000217737 624 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 AC161117.2-201ENSMUST00000221908 451 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Rpl31-201ENSMUST00000086535 1049 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 9130023H24Rik-201ENSMUST00000078816 3574 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Rbm6-ps1-201ENSMUST00000186192 2870 ntBASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
Sf3a3Q9D554 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Akap9-201ENSMUST00000044492 13123 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm18359-201ENSMUST00000173024 1459 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Nup93-202ENSMUST00000109547 2847 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm25594-201ENSMUST00000102274 82 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Zscan30-201ENSMUST00000115829 484 ntTSL 2 BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm14519-201ENSMUST00000118490 312 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm25545-201ENSMUST00000122673 323 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 n-R5s43-201ENSMUST00000122739 110 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm22461-201ENSMUST00000175272 70 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm7577-201ENSMUST00000182543 982 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm7456-201ENSMUST00000182862 1011 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm18058-201ENSMUST00000207385 492 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Olfr61-204ENSMUST00000211685 1212 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 AC125543.2-201ENSMUST00000222114 105 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 CT030170.7-201ENSMUST00000223372 103 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 AC158531.1-201ENSMUST00000224617 457 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 AC157772.1-201ENSMUST00000226266 365 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 AC125539.1-201ENSMUST00000227423 622 ntBASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Borcs8-201ENSMUST00000002418 810 ntAPPRIS P3 TSL 1 (best) BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Gm10024-201ENSMUST00000075421 553 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Sf3a3Q9D554 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms