Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Morc2a-201ENSMUST00000093389 5085 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Rabl3-201ENSMUST00000023524 2031 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Lmbrd1-206ENSMUST00000191471 4453 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Fblim1-201ENSMUST00000006381 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Lmx1a-201ENSMUST00000028003 3347 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Dlgap5-201ENSMUST00000043296 2964 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 1700007E05Rik-201ENSMUST00000186196 1513 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm11416-201ENSMUST00000119111 863 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm9439-201ENSMUST00000119554 973 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Mir1929-201ENSMUST00000158635 93 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 n-R5s209-201ENSMUST00000179494 119 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm21542-201ENSMUST00000182307 993 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm5261-201ENSMUST00000185860 713 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Arpp21-203ENSMUST00000111872 3316 ntTSL 5 BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Arpp21-229ENSMUST00000164754 3310 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm7882-201ENSMUST00000177915 1762 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Mpdz-201ENSMUST00000102830 7512 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm21026-201ENSMUST00000218628 1345 ntBASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
Cdh23Q99PF4 Gm11868-201ENSMUST00000121594 1478 ntBASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Gm8662-201ENSMUST00000118644 574 ntBASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Gm14018-201ENSMUST00000119042 455 ntBASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Gm11796-201ENSMUST00000120208 972 ntBASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Mir7674-201ENSMUST00000184964 63 ntBASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Cdh23Q99PF4 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Phf6-201ENSMUST00000078944 4350 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC7.59□□□□□ -1.2
Cdh23Q99PF4 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Htr2c-201ENSMUST00000036303 4747 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gbp6-201ENSMUST00000196520 2604 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Kantr-207ENSMUST00000195280 4212 ntAPPRIS P1 TSL 2 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 AC115760.1-201ENSMUST00000225160 1327 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 AC165148.1-201ENSMUST00000224795 2372 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Musk-201ENSMUST00000081919 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Rhox4a2-201ENSMUST00000179915 901 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm29349-201ENSMUST00000188692 174 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm18009-201ENSMUST00000203239 1016 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm4556-201ENSMUST00000217808 355 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 AC125543.2-201ENSMUST00000222114 105 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 CT030170.7-201ENSMUST00000223372 103 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Olfr1307-202ENSMUST00000099606 939 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Olfr1306-201ENSMUST00000099607 939 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm45354-201ENSMUST00000199820 2557 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm15109-201ENSMUST00000133085 2026 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Prdm14-201ENSMUST00000047577 2564 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Nsun6-204ENSMUST00000114715 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm20401-201ENSMUST00000173717 212 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 355.6 ms