Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 AC112265.1-201ENSMUST00000213522 1501 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Esrrg-202ENSMUST00000110938 5373 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 9930111J21Rik1-202ENSMUST00000097494 3863 ntAPPRIS P1 TSL 5 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm22934-201ENSMUST00000103961 132 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Smim23-202ENSMUST00000109365 331 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Efcab9-202ENSMUST00000109377 615 ntAPPRIS ALT2 TSL 3 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm12959-201ENSMUST00000119396 403 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm25265-201ENSMUST00000158520 347 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm22424-201ENSMUST00000158527 87 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm24347-201ENSMUST00000158711 142 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm23822-201ENSMUST00000158739 128 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Paip1-206ENSMUST00000173627 1233 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Mir6940-201ENSMUST00000183447 70 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Mir6239-201ENSMUST00000183564 105 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm17867-201ENSMUST00000188981 391 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Vmn2r-ps26-201ENSMUST00000202039 2111 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm44743-201ENSMUST00000209062 386 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm45394-201ENSMUST00000209240 1175 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Cenpn-205ENSMUST00000212775 837 ntTSL 3 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm8767-201ENSMUST00000215786 1070 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 RMST_1.1-214ENSMUST00000220389 633 ntTSL 2 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Olfr120-201ENSMUST00000077498 993 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Trim29Q8R2Q0 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm44141-201ENSMUST00000204231 1583 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm10744-201ENSMUST00000220184 2706 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm15083-201ENSMUST00000138670 1413 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Pcm1-204ENSMUST00000211247 6484 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm12187-201ENSMUST00000119584 1375 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Nip7-201ENSMUST00000034392 3036 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm16204-201ENSMUST00000117864 1897 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm13255-201ENSMUST00000117255 547 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm15224-201ENSMUST00000120501 388 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm25320-201ENSMUST00000122551 324 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm23663-201ENSMUST00000158045 80 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm25947-201ENSMUST00000180343 110 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Trav22-201ENSMUST00000198117 346 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Klk1b2-ps-201ENSMUST00000206099 786 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Trim29Q8R2Q0 AC105958.1-201ENSMUST00000214783 2144 ntBASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 Acsm5-201ENSMUST00000066465 2981 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 Kcnmb2-203ENSMUST00000178668 2917 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 Gm43679-201ENSMUST00000197051 3677 ntBASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Trim29Q8R2Q0 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim29Q8R2Q0 Virma-202ENSMUST00000059914 6506 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Trim29Q8R2Q0 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms