Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Dmd-202ENSMUST00000113992 1858 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm23131-201ENSMUST00000104253 132 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm11922-201ENSMUST00000118967 475 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm12687-201ENSMUST00000119752 706 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Scgb2b30-201ENSMUST00000187013 336 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Scgb2b10-201ENSMUST00000191403 318 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm5857-201ENSMUST00000198953 493 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm8667-201ENSMUST00000211112 449 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 AC124712.1-201ENSMUST00000221833 445 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 CT009515.2-201ENSMUST00000226126 736 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm43581-201ENSMUST00000196766 2864 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Osbpl3-204ENSMUST00000114468 6494 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Rnf219-201ENSMUST00000022716 3420 ntAPPRIS P2 TSL 3 BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm44249-201ENSMUST00000204538 1805 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Prkaa1-202ENSMUST00000228218 4618 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Skap1-201ENSMUST00000071510 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm37786-201ENSMUST00000191714 3225 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm23946-201ENSMUST00000104423 197 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm24257-201ENSMUST00000104472 131 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 n-R5s76-201ENSMUST00000122700 113 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm6689-201ENSMUST00000130905 481 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm12089-201ENSMUST00000138402 428 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm3142-201ENSMUST00000190107 414 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm36996-201ENSMUST00000194466 250 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm16273-201ENSMUST00000202238 268 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm35412-201ENSMUST00000220437 999 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 AC207128.2-202ENSMUST00000224010 808 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 AC207128.1-201ENSMUST00000225928 799 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Eif3k-201ENSMUST00000066070 774 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Olfr401-201ENSMUST00000079827 948 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm20706-201ENSMUST00000175985 2023 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm44165-201ENSMUST00000203093 1469 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 AC125487.2-201ENSMUST00000219810 1300 ntBASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Grip1-211ENSMUST00000144959 3462 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Ccdc38Q8CDN8 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 Stat4-201ENSMUST00000027277 2982 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 Gm45182-201ENSMUST00000207579 2404 ntBASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 Grik1-209ENSMUST00000227986 2942 ntBASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 Rpl22-201ENSMUST00000103191 474 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Ccdc38Q8CDN8 Mir467f-201ENSMUST00000116923 120 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms