Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp47Q8BY87 Tsc1-202ENSMUST00000113867 7682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp47Q8BY87 Tsc1-201ENSMUST00000028155 7674 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Usp47Q8BY87 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC10.95□□□□□ -0.66
Usp47Q8BY87 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Usp47Q8BY87 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Usp47Q8BY87 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Cdc42-201ENSMUST00000030417 1448 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Gm38331-201ENSMUST00000195719 2671 ntBASIC10.94□□□□□ -0.66
Usp47Q8BY87 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Gm24284-201ENSMUST00000104240 142 ntBASIC10.94□□□□□ -0.66
Usp47Q8BY87 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Gm7418-201ENSMUST00000162120 801 ntBASIC10.94□□□□□ -0.66
Usp47Q8BY87 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Gm28164-201ENSMUST00000190143 442 ntBASIC10.94□□□□□ -0.66
Usp47Q8BY87 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC10.94□□□□□ -0.66
Usp47Q8BY87 Gm9249-201ENSMUST00000221420 578 ntBASIC10.94□□□□□ -0.66
Usp47Q8BY87 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Dhx8-201ENSMUST00000039152 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Apod-203ENSMUST00000130560 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Arhgap12-212ENSMUST00000182559 4265 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Usp47Q8BY87 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm5228-201ENSMUST00000117186 357 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm5390-201ENSMUST00000119069 1230 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm11416-201ENSMUST00000119111 863 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm23007-201ENSMUST00000158951 177 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm8624-202ENSMUST00000165677 669 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm9556-201ENSMUST00000182938 940 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm28006-201ENSMUST00000183841 122 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Mir6409-201ENSMUST00000184957 92 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm28573-201ENSMUST00000187821 380 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm28145-201ENSMUST00000189742 380 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm4785-201ENSMUST00000191025 751 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm28400-201ENSMUST00000191332 380 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm8077-201ENSMUST00000209221 1024 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC10.93□□□□□ -0.66
Usp47Q8BY87 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 AC069562.1-201ENSMUST00000224206 434 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 AC139209.2-201ENSMUST00000227680 1208 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Dclk1-207ENSMUST00000198412 4282 ntTSL 5 BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 AC154171.3-201ENSMUST00000224519 2505 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm42595-201ENSMUST00000196771 1607 ntBASIC10.93□□□□□ -0.66
Usp47Q8BY87 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Usp47Q8BY87 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Celf1-208ENSMUST00000111455 7579 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Gm13038-201ENSMUST00000119886 459 ntBASIC10.92□□□□□ -0.66
Usp47Q8BY87 Gm25780-201ENSMUST00000122528 253 ntBASIC10.92□□□□□ -0.66
Usp47Q8BY87 Gm7991-201ENSMUST00000168668 591 ntBASIC10.92□□□□□ -0.66
Usp47Q8BY87 Gm6536-201ENSMUST00000171180 615 ntBASIC10.92□□□□□ -0.66
Usp47Q8BY87 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Ctxn3-203ENSMUST00000209786 1283 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 AC118249.1-201ENSMUST00000224822 608 ntBASIC10.92□□□□□ -0.66
Usp47Q8BY87 AC159205.7-201ENSMUST00000225988 692 ntBASIC10.92□□□□□ -0.66
Usp47Q8BY87 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Gm37618-201ENSMUST00000192891 3075 ntBASIC10.92□□□□□ -0.66
Usp47Q8BY87 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Gm45512-201ENSMUST00000210432 1553 ntBASIC10.92□□□□□ -0.66
Usp47Q8BY87 C87436-202ENSMUST00000113698 2922 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Zzef1-208ENSMUST00000207107 11306 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Nup155-201ENSMUST00000163765 6402 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Usp47Q8BY87 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms