Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Vsig1-201ENSMUST00000033806 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm23835-201ENSMUST00000104439 132 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm14745-201ENSMUST00000118480 1096 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm13690-201ENSMUST00000118989 285 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm15224-201ENSMUST00000120501 388 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm11258-201ENSMUST00000121086 1218 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 2010013B24Rik-201ENSMUST00000126922 747 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm19807-201ENSMUST00000173971 667 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm5977-201ENSMUST00000174304 573 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm26590-201ENSMUST00000180857 1277 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm7678-201ENSMUST00000181879 943 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm43895-201ENSMUST00000203219 855 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm9038-201ENSMUST00000203400 604 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm44018-201ENSMUST00000204471 407 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm10120-201ENSMUST00000219845 357 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 AC138330.1-201ENSMUST00000220690 1127 ntTSL 5 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 AC123058.1-201ENSMUST00000223748 437 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 AC147044.1-201ENSMUST00000223850 552 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 AC110236.1-201ENSMUST00000227807 527 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 AC134414.1-201ENSMUST00000228499 1221 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Fabp5l2-201ENSMUST00000072582 408 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Rab23-202ENSMUST00000115174 4218 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm1982-201ENSMUST00000188615 1887 ntBASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Ltn1-201ENSMUST00000039449 7737 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Ublcp1-201ENSMUST00000102795 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gm4890-201ENSMUST00000181030 3784 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Mndal-201ENSMUST00000111210 1907 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Gatb-204ENSMUST00000127348 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 L1td1-202ENSMUST00000154279 2942 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Fam110b-202ENSMUST00000108380 3119 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 Foxp3-203ENSMUST00000115739 3739 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Pcdh19Q80TF3 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Wdr48-205ENSMUST00000215307 3776 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Fer-201ENSMUST00000000129 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm15066-201ENSMUST00000120163 2608 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 4930408K08Rik-201ENSMUST00000195936 1436 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Peak1-201ENSMUST00000061552 6996 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Zbtb44-206ENSMUST00000217092 2472 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Slc31a1-201ENSMUST00000084526 3718 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Dtna-202ENSMUST00000115832 6295 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Sars-201ENSMUST00000090553 3570 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Chrdl2-202ENSMUST00000107084 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm13108-201ENSMUST00000122287 1455 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gimap8-201ENSMUST00000078223 3160 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm23358-201ENSMUST00000103887 110 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm4177-201ENSMUST00000105196 918 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm12034-201ENSMUST00000119032 399 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm12825-201ENSMUST00000120249 563 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm11676-201ENSMUST00000120443 490 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm12163-201ENSMUST00000121597 389 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm11358-201ENSMUST00000122310 373 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm14339-201ENSMUST00000146224 423 ntTSL 2 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm26048-201ENSMUST00000157305 142 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm25770-201ENSMUST00000158566 115 ntBASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Ighv1-62-2-201ENSMUST00000163467 302 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Ighv1-71-201ENSMUST00000166645 302 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Adgrf4-203ENSMUST00000167993 2983 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r9-201ENSMUST00000171186 1051 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
Pcdh19Q80TF3 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms