Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 2310039L15Rik-202ENSMUST00000219492 3743 ntTSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Mir683-2-201ENSMUST00000102099 109 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm12192-201ENSMUST00000120146 487 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm11534-202ENSMUST00000129261 470 ntTSL 3 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm12496-201ENSMUST00000154377 668 ntTSL 3 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm16107-201ENSMUST00000162523 862 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm17069-201ENSMUST00000172256 490 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Mir683-1-201ENSMUST00000179371 109 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm28064-201ENSMUST00000185639 858 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm40330-201ENSMUST00000196498 669 ntTSL 3 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 6330419E04Rik-201ENSMUST00000203087 1263 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm45338-205ENSMUST00000210795 728 ntTSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 AC153361.2-203ENSMUST00000218083 661 ntTSL 3 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 AC140264.1-201ENSMUST00000220023 469 ntTSL 3 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 AC192434.1-201ENSMUST00000225464 390 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Mir212-201ENSMUST00000083656 91 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Aadacl4-201ENSMUST00000094510 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm6640-201ENSMUST00000120629 1587 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 4930488N15Rik-201ENSMUST00000212830 1561 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 4930432O09Rik-201ENSMUST00000219710 1986 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Nr3c2-201ENSMUST00000034031 2955 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm38014-201ENSMUST00000193349 2612 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Mapk8-205ENSMUST00000111945 5756 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm10743-201ENSMUST00000219611 2358 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Parn-201ENSMUST00000058884 2902 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Slc25a14-202ENSMUST00000114936 1582 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Apobec4-201ENSMUST00000068875 1566 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm45251-201ENSMUST00000209486 1465 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm3742-201ENSMUST00000220907 1391 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm22268-201ENSMUST00000104009 131 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm11199-201ENSMUST00000118691 507 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm11245-201ENSMUST00000119419 1037 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm6586-201ENSMUST00000167028 643 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm8857-201ENSMUST00000170064 1102 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm26623-201ENSMUST00000180911 850 ntTSL 5 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm4891-201ENSMUST00000182279 912 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Mocs2-210ENSMUST00000183407 1074 ntTSL 5 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm27435-201ENSMUST00000183588 88 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm27283-201ENSMUST00000184853 323 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm27483-201ENSMUST00000184983 71 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm29168-201ENSMUST00000189953 687 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm17979-201ENSMUST00000196646 611 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm44044-201ENSMUST00000205178 1089 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm7482-201ENSMUST00000206446 505 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm4739-201ENSMUST00000218296 633 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 AC125543.2-201ENSMUST00000222114 105 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 CT030170.7-201ENSMUST00000223372 103 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 AC114585.2-203ENSMUST00000228400 339 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Tdgf1-ps2-201ENSMUST00000074412 505 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm26264-201ENSMUST00000083278 159 ntBASIC8.28□□□□□ -1.08
CtifQ6PEE2 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Gm4319-201ENSMUST00000191139 2048 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Nrg4-213ENSMUST00000164721 1927 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Vwa3a-204ENSMUST00000166668 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Trps1-201ENSMUST00000077935 4436 ntAPPRIS P3 TSL 1 (best) BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
CtifQ6PEE2 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
CtifQ6PEE2 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.08
CtifQ6PEE2 Gm5702-201ENSMUST00000185629 2469 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Catspere1-201ENSMUST00000194528 2949 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm7682-202ENSMUST00000202916 1582 ntAPPRIS P5 TSL 5 BASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms