Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm10123-201ENSMUST00000075723 490 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Mir146b-201ENSMUST00000093619 109 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Ptprb-203ENSMUST00000218553 7016 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Ggta1-202ENSMUST00000079424 3254 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Mpdz-216ENSMUST00000220807 6295 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm38173-201ENSMUST00000193126 2314 ntBASIC8.28□□□□□ -1.08
Trim43aQ3TL54 Gm8428-201ENSMUST00000159919 1784 ntBASIC8.27□□□□□ -1.08
Trim43aQ3TL54 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm44436-201ENSMUST00000204200 1494 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm14519-201ENSMUST00000118490 312 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm8215-201ENSMUST00000120627 990 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm26040-201ENSMUST00000158147 161 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm18191-201ENSMUST00000174624 824 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Mir5623-201ENSMUST00000176631 70 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm26436-201ENSMUST00000180325 132 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm42667-201ENSMUST00000196132 234 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 AC122539.2-201ENSMUST00000220207 404 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Tssk4-206ENSMUST00000228041 1217 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Tcl1b3-201ENSMUST00000090990 1045 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Arhgap12-208ENSMUST00000182213 4162 ntAPPRIS ALT1 TSL 5 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 AC165260.6-202ENSMUST00000224959 1958 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Ifit1bl2-201ENSMUST00000087357 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm38099-201ENSMUST00000193280 3170 ntBASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Yme1l1-201ENSMUST00000028117 4707 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 0610031O16Rik-203ENSMUST00000185046 1429 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Frmpd4-202ENSMUST00000112146 8153 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Trim43aQ3TL54 Grik1-210ENSMUST00000228034 2708 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm9105-201ENSMUST00000120160 1398 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm25762-201ENSMUST00000103984 132 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm11241-201ENSMUST00000117371 896 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm13526-201ENSMUST00000117970 189 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm13160-201ENSMUST00000118441 627 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm6798-201ENSMUST00000119961 360 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm12870-201ENSMUST00000121383 1016 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm11953-201ENSMUST00000122352 1003 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm23220-201ENSMUST00000158115 137 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm20452-201ENSMUST00000174686 513 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm24083-201ENSMUST00000175174 120 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm27043-201ENSMUST00000182807 958 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm37108-201ENSMUST00000194605 626 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Ighv8-16-201ENSMUST00000199258 294 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm9110-201ENSMUST00000219035 617 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 AC167013.6-201ENSMUST00000226587 1067 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Olfr698-201ENSMUST00000074981 936 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 n-R5s28-201ENSMUST00000082814 119 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Olfr1012-201ENSMUST00000099916 936 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms